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NECEvent2014_6_6_Clostridiales_50_23_scaffold_305_3

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1242..2075)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO: similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 253.0
  • Bit_score: 185
  • Evalue 1.40e-43
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 247.0
  • Bit_score: 181
  • Evalue 2.40e-43
tRNA pseudouridine synthase A n=3 Tax=Dehalobacter RepID=K4KUF8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 247.0
  • Bit_score: 181
  • Evalue 8.50e-43

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Taxonomy

Syntrophaceticus schinkii → Syntrophaceticus → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 834
ATGCAGCGCTTTAAAGTCACCATCGCCTATGACGGCTCCGGCTTTCATGGTTTCCAGCGGCAAGCGGATGAGCGCTTGCGCACGGTCCAGGGGGAACTGGAGACCCGGCTGACCAAACTTTTAGCCGAGCCGATCGGCATTCACGCCGCCGGGCGAACCGATGCCGGCGTGCACGCCAAAGGGCAGGTCTTTCATTTTGACACGGAGCGGCGGATTACAGCGGATGGCCTGCTCTATGCGGTTAACCGGTATTTGCCGGCAGACCTTACCGCCACCGCTGTCGCTGCAGTGCCAGCGTCCTTTCATGCCCGCAAGCACGCCCTCGGCAAATGCTACAGCTATCACCTGTATACGGGTCGCCGCCTGCCCGCCATCGGGCACATGTACCTGGCCCATGAGGTGCAGCCGGTGGATTGTGGTCGCTTGGCGGCGGTTTTGGCCCAAGCGGAAGGGGCCCATCATTTCGGTGGTTTCTGTGGCCGCGGGGCCACCACCCTGACCTATGACCGGACCTTGTACCGGATCCGGGTTCTGGTCCGGGGGGACTATGTGAGCGTTTACCTGATTGGTGACGGCTTCCTGCGGAAAATGGTGCGCAACCTGGTTGGCACTGCCTTGGACGAGGCCGTCGGGCGAAAGCCTGCCGGCCTTTTCGCCAAAGCCCTGGCCTCCGGCAAACGGACAGACGGCGGCAACACGGCGCCGGCCCAAGGCCTTTTTTTAGAAAGCGTTTACTACAGCGAAAGGGACTTGACCGATGGCATAGCCCGGCTGGAGGCAGCGCAACCGGAAGGCTTTGCCGGTCCGGCCGCTATCTTTCAGCAACTTTTTTAG
PROTEIN sequence
Length: 278
MQRFKVTIAYDGSGFHGFQRQADERLRTVQGELETRLTKLLAEPIGIHAAGRTDAGVHAKGQVFHFDTERRITADGLLYAVNRYLPADLTATAVAAVPASFHARKHALGKCYSYHLYTGRRLPAIGHMYLAHEVQPVDCGRLAAVLAQAEGAHHFGGFCGRGATTLTYDRTLYRIRVLVRGDYVSVYLIGDGFLRKMVRNLVGTALDEAVGRKPAGLFAKALASGKRTDGGNTAPAQGLFLESVYYSERDLTDGIARLEAAQPEGFAGPAAIFQQLF*