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NECEvent2014_6_6_Clostridiales_50_23_scaffold_404_7

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4137..4400)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=883081 species="Bacteria; Firmicutes; Bacilli; similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 86.0
  • Bit_score: 103
  • Evalue 1.30e-19
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 84.0
  • Bit_score: 99
  • Evalue 3.80e-19
Ribonuclease R n=1 Tax=Alloiococcus otitis ATCC 51267 RepID=K9E7F9_9LACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 86.0
  • Bit_score: 103
  • Evalue 9.40e-20

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Taxonomy

Alloiococcus otitis → Alloiococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 264
AGGGTGGTCAGCGTGACCGGATTTGGACTGTTTGTTCAACTGGACAATTCGGTGGAAGGACTGGTGCACATTTCAACGATGGTGGATGATTTTTATCATTTTAATCCGGACCAACTTTTGCTGGTCGGGGAGCATAGCGGCCGGTCTTATCGACTAGGCGAAAGCGTCACGGTGCGCTTGCTCAAAGCCAATGTTGATCTGGTCCAGCTTGATTTTGAATTGGTTTCTGAACAGGAGGCGGAAAATGAAGGTCATCACAGATAA
PROTEIN sequence
Length: 88
RVVSVTGFGLFVQLDNSVEGLVHISTMVDDFYHFNPDQLLLVGEHSGRSYRLGESVTVRLLKANVDLVQLDFELVSEQEAENEGHHR*