ggKbase home page

NECEvent2014_9_1_Candida_parapsilosis_39_137_scaffold_69_34

Organism: NECEvent2014_9_1_Candida_parapsilosis_39_137_plum

megabin RP 29 / 55 MC: 7 BSCG 0 / 51 ASCG 35 / 38 MC: 10
Location: comp(49476..49994)

Top 3 Functional Annotations

Value Algorithm Source
60S ribosomal protein L20 n=1 Tax=Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) RepID=G8BI31_CANPC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 348
  • Evalue 4.30e-93
  • rbh
60S ribosomal protein L20 {ECO:0000256|PIRNR:PIRNR002190}; TaxID=578454 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 348
  • Evalue 6.00e-93
Rpl20b predicted ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 346
  • Evalue 5.10e-93
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candida parapsilosis → Candida → Saccharomycetales → Saccharomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 519
ATGTCAAGATTAAACGAATATCAAGTTATCGGTCGTCGTTTGCCAACCGACTCCGCTCCAGAACCAAAGTTGTTCCGTATGAGAATCTTTGCACCAAACACCGTTGTTGCTAAGTCAAGATACTGGTACTTTTTACAAAAATTGCACAAGGTCAAGAAAGCCTCTGGTGAAATCGTTTCAGTTAACGTCATCAACGAAGCCAAGCCAACCAAGGTCAAGACTTTTGGTGTTTGGATCAGATACGAATCAAGATCCGGTATCCACAACATGTACAAGGAATACAGAGATGTCACCAGAGTCGGTGCCGTTGAAACCATGTACCAAGATTTGGCTGCTAGACACAGAGCCAGATTTAGAAGTATTCACATTTTGAAGGTTGTCGAATTGCAAAAAGCTGACGATGTCAAGAGACAATACGTTAAACAATTCTTGACCAAAGACTTGAAATTCCCATTGCCACACAGAGTTCAAAAGACCAAGGCTTTGTTCTACAGCAACAGGCCATCAACTTTTTACTAA
PROTEIN sequence
Length: 173
MSRLNEYQVIGRRLPTDSAPEPKLFRMRIFAPNTVVAKSRYWYFLQKLHKVKKASGEIVSVNVINEAKPTKVKTFGVWIRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIHILKVVELQKADDVKRQYVKQFLTKDLKFPLPHRVQKTKALFYSNRPSTFY*