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13_1_40cm_4_scaffold_2658

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2658_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(123..728)
DNA (606bp) protein (202aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C284_SPHTD
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ACZ38351.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sp
13_1_40cm_4_scaffold_2658_2
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(728..1303)
DNA (576bp) protein (192aa)
Protease, putative n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B6P5_PELLD
peptidase M22 family protein Tax=CG_Anaero_04
protease
13_1_40cm_4_scaffold_2658_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1287..1715)
DNA (429bp) protein (143aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein id=24419642 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_4_scaffold_2658_4
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(1687..2553)
DNA (867bp) protein (289aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RBG_16_Chloroflexi_57_8_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037DD298
13_1_40cm_4_scaffold_2658_5
unknown

Not on your lists

comp(3149..3907)
DNA (759bp) protein (253aa)

This feature has no annotations

13_1_40cm_4_scaffold_2658_6
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3908..4126)
DNA (219bp) protein (73aa)
anti-sigma factor n=1 Tax=Brevibacterium linens RepID=UPI0000510519
Anti sigma-R factor, mycothiol system,RsrA {ECO:0000313|EMBL:KHS51846.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linen
putative transmembrane anti-sigma factor
13_1_40cm_4_scaffold_2658_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4123..4701)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEG4_9CHLR
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;"
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_2658_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4762..5793)
DNA (1032bp) protein (344aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P0F6_9FIRM
13_1_40cm_4_scaffold_2658_9
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(5834..7015)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLH4_9CLOT
carbohydrate kinase Tax=RBG_16_Chloroflexi_60_22_curated
carbohydrate kinase
13_1_40cm_4_scaffold_2658_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7032..8876)
DNA (1845bp) protein (615aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
13_1_40cm_4_scaffold_2658_11
unknown

Not on your lists

comp(8955..9926)
DNA (972bp) protein (324aa)

This feature has no annotations

13_1_40cm_4_scaffold_2658_12
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9923..10819)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHV1_9FIRM
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69305.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
membrane protein
13_1_40cm_4_scaffold_2658_13
Geobacillus sp. A8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10816..11742)
DNA (927bp) protein (309aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=1 Tax=Geobacillus sp. A8 RepID=T0Q950_9BACI
ornithine carbamoyltransferase
13_1_40cm_4_scaffold_2658_14
unknown

Not on your lists

comp(11774..12247)
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_4_scaffold_2658_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12375..13868)
DNA (1494bp) protein (498aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWA2_Rokubacteria_73_35_curated
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Caulobacter crescentus OR37 RepID=R0E7L6_CAUCE
AMP-dependent synthetase and ligase
13_1_40cm_4_scaffold_2658_16
unknown

Not on your lists

13967..14134
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_2658_17
unknown

Not on your lists

14230..15141
DNA (912bp) protein (304aa)

This feature has no annotations

13_1_40cm_4_scaffold_2658_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15103..15930)
DNA (828bp) protein (276aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured alpha proteobacterium HF0070_14E07 RepID=E0XS54_9PROT
N5,N10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:ETX00075.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus En
oxidoreductase
13_1_40cm_4_scaffold_2658_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

15986..16720
DNA (735bp) protein (245aa)
Metallophosphoesterase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C752_SPHTD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACZ39698.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source
13_1_40cm_4_scaffold_2658_20
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(16807..17484)
DNA (678bp) protein (226aa)
Protein tyrosine/serine phosphatase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIH8_THET1
protein tyrosine/serine phosphatase
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ACZ43549.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_4_scaffold_2658_21
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17565..17957)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=2 Tax=Desulfotomaculum RepID=F6B5S8_DESCC
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" so
13_1_40cm_4_scaffold_2658_22
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17950..18414)
DNA (465bp) protein (155aa)
50S ribosomal protein L13 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0U3_HALOH
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;
13_1_40cm_4_scaffold_2658_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18454..19185)
DNA (732bp) protein (244aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZP5_THEOJ
13_1_40cm_4_scaffold_2658_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(19204..19557)
DNA (354bp) protein (118aa)
50S ribosomal protein L17 n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A503_DEIPD
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L17
13_1_40cm_4_scaffold_2658_25
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19566..20507)
DNA (942bp) protein (314aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TXI5_SULAD
DNA-directed RNA polymerase subunit alpha Tax=S_Thermoanaerobacterales_50_218
rpoA; DNA-directed RNA polymerase subunit alpha
13_1_40cm_4_scaffold_2658_26
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20550..21170)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS4_PELTS
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropioni
13_1_40cm_4_scaffold_2658_27
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21174..21569)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Paenibacillus fonticola RepID=UPI00036F1742
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
13_1_40cm_4_scaffold_2658_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


comp(21592..21990)
DNA (399bp) protein (133aa)
30S ribosomal protein S13 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC0_9CHLR
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
30S ribosomal protein S13
13_1_40cm_4_scaffold_2658_29
Helicobacter sp. MIT 05-5293, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21999..22115)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=E4VKS7_9HELI
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1548149 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae
rpmJ; 50S ribosomal protein L36
13_1_40cm_4_scaffold_2658_30
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22112..22375)
DNA (264bp) protein (88aa)
Translation initiation factor IF-1 n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IUF1_9BACL
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
translation initiation factor IF-1
Displaying items 1-30 of 33 in total

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