ggKbase home page

13_1_40cm_4_scaffold_1087_7

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(4575..6536)

Top 3 Functional Annotations

Value Algorithm Source
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A7D0_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 675.0
  • Bit_score: 301
  • Evalue 2.30e-78
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 654.0
  • Bit_score: 530
  • Evalue 8.50e-148
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 654.0
  • Bit_score: 530
  • Evalue 4.20e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1962
ATGCACCACGCCCTCTGGCTGCGTCTGAGCTTGCTATCTTCGCTCGCTGCGTCGGTGGCGGTCGCGGCCCAGGAGCCCGACACCATCGTGCTGAATCCCGTCCTCGTGACCGCCACCCGCGTTCCTACGCCGGTGGACGCGGTGACGGCAGCAGTCACGGTCGTCTCGGGCCGCGAGCTCCAGCTGCGTGGAATCCGGACCGTAGCGGAGGCCCTGCGCACCGTCCCCGGCGCCGCCGTCGTCGAAACCGGGTCGTACGGCGGCCAAACCTCGCTGTTCCTGCGGGGCGGCGAGAGCGACTACGTGAAGGTTCTCGTGGACGGCGTGCCGCAGAACCAGCCCGGTGGCGCGTTCGACTTCGCCGACCTCACGACCGACAACGTGGACCGGATCGAGATCGTGCGCGGTCCGGCGAGCGTGCTCTACGGATCGGATGCGGTCACGGGCGTGATCCAGATCTTCACGCGCACGGGAAGCGGCGCGCCGCGGGTCACCGCGGCGGCACGCGCCGGGACCTACGGCTCGGCCGAGTACGAGACCGGCCTCGCGGGAGGCGGCTCGCGTGCGAGCTATTCGGTCACGGTATCGCGCTTCCGCTCCGACGGTCTCTACCCCTACAACAATCAGTATCGGAACACGGTGGTCAGCAGTCGGGTCCGCTTGGCGCCCGACGACCGGACCGACGCGAGCCTCACGTACCGCTGGGGCGACGATACCTATCACTTTCCGACCAACGGGGCGGGGCAGCCCGTGGACTCGAACCAGTTCAGCGCAGAGCGGGGGCCGAGTCTGAGCGTGGACGCAGGCCGCCGGTTCGGTGCCGGCCTCGAGGTGCGGGGCGTGGCGGCGCTGCGCGAGCTCCGGCTCCGCTCGGAGGACCGGCCGGATTCCCCCGGCGAAGACGGCAGCTTCGAGAGCCGGGACTTCGTGCGGCGGGCGAGCGGCGGAGTGCTCGCGACCTGGCGGCGCGCCGGCGCCGCCGTGACGGCCGGGATCGACTACGAAGACGAGCGCCAAACCGGGCGGAGCGTGTTCACGGCCTCGTTCGGGACGTTCCCCGACTCGATCAACGTGCTGCGGTGGAACACGGGGTACTACGCGCAGGCGCTGTTCACGGGCGGGAGCCCCCTCAGCCTGACGCTCGGCGGGCGTGTGGACGACAACTCGCAGTTCGGCACGCACGGCACGTTCCGCGCGGGCGTCTCCTACCGGATCGACCCGGCCACGCGCGTTCGCGCGATGGTGGGCACCGGGTACAAGGAGCCGACATTCTTCGAGAACTTCGCGCGCGGCTCCGTGCACGGAAACCCGAACCTCGATCCCGAGCGCTCCACGAGCTGGGAAGCGGGCCTCGAGCGCGCCTGGGGCGACGGACGGGTGCGCGTCGCACTGACCTACTTCGATCAGCGATTCCGCGATTTGATCGAGTTCACGTTCACCCCCGCGCCGCCCGACACCGTCAATTACTTCAATGTCGCGGGAGCATTGGCCCGCGGGATCGAAGCGAGCGCCGAGGTTCGGCTCGCTCGAGACGTAGTCGCCACGCTGGCCTACACCTATCTCCACACGAGGGTCGACAACCCCGGCCTCGACTCGAGCCCGGACGGCCTCTTCGCCGCCGGTCAATCGTTGCTCCGGCGCCCGGCGCACACCCTCACGCCGCAAGTCGCCGCGGCGCTGGGCGGGCGCGGGCACGTGGTGTTCGGCGCACACTGGGTAGGCCGGCGTGACGACCTCGACTTCTCACGCCCAGCCGGCGAGCGACGCGTTTCGCTGCACGCCTACGCCCGCGTGAGCCTCGCCGGCCAGTACACCATGCTCGGTCATGATGGTGCCGGCCGGTTCGTAGCACTCACCGCGCGGATCGAGAACCTCTTGAACGATCGTGCTCCCGAGATCGCAGGCTTCCTGCCGCGGGGCCGCACGATTCTCGCGGGTGCGCGCGTGGGCGTCGGGCCCTAG
PROTEIN sequence
Length: 654
MHHALWLRLSLLSSLAASVAVAAQEPDTIVLNPVLVTATRVPTPVDAVTAAVTVVSGRELQLRGIRTVAEALRTVPGAAVVETGSYGGQTSLFLRGGESDYVKVLVDGVPQNQPGGAFDFADLTTDNVDRIEIVRGPASVLYGSDAVTGVIQIFTRTGSGAPRVTAAARAGTYGSAEYETGLAGGGSRASYSVTVSRFRSDGLYPYNNQYRNTVVSSRVRLAPDDRTDASLTYRWGDDTYHFPTNGAGQPVDSNQFSAERGPSLSVDAGRRFGAGLEVRGVAALRELRLRSEDRPDSPGEDGSFESRDFVRRASGGVLATWRRAGAAVTAGIDYEDERQTGRSVFTASFGTFPDSINVLRWNTGYYAQALFTGGSPLSLTLGGRVDDNSQFGTHGTFRAGVSYRIDPATRVRAMVGTGYKEPTFFENFARGSVHGNPNLDPERSTSWEAGLERAWGDGRVRVALTYFDQRFRDLIEFTFTPAPPDTVNYFNVAGALARGIEASAEVRLARDVVATLAYTYLHTRVDNPGLDSSPDGLFAAGQSLLRRPAHTLTPQVAAALGGRGHVVFGAHWVGRRDDLDFSRPAGERRVSLHAYARVSLAGQYTMLGHDGAGRFVALTARIENLLNDRAPEIAGFLPRGRTILAGARVGVGP*