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13_1_40cm_4_scaffold_1241_12

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 9337..9945

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 194.0
  • Bit_score: 279
  • Evalue 3.10e-72
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 200.0
  • Bit_score: 244
  • Evalue 7.80e-62
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 202.0
  • Bit_score: 128
  • Evalue 1.80e-27

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCCCGAGGCGCTGGGTACGCGGGTGGATGTCGACGCTGGACTCGTGGAGGCGTTGCGACGGGACGATCCGGGCGCCGCCGAGCAGCTCGTCGAGCGCTACGGCGAGCGGGTCTACCGGCTGGCGGTGCGGATCACCGGCACGAGCGACGACGCCGAAGCAGCCGCCCAGGACGCGTTGTCGAGGGCCACTCGCACGATCGACACGTTCAAGGGTGAATTGGCCTTCGGCTCCTGGATCGACCGGATCGCCGCCGGCGCAGCGTACCAGAAGCTGCGGACGCGGCGGCCGAAGACCGGAGAGATCGCGCTCGACGAGGTGCTGCCCGCGTTCGACGGTGACGGCCGCCACTTCGAGCCGATGGACGACTGGTCGGGTCGGGTCGACGAGCGGGGAGCGCAGGGTGAGCTGCGCCGGGTCCTGACCGACGCGATCGACGCGCTGCCGCCGGACTATCGGACGGCGCTGGTCCTCCACGACGTCGAAGGCCTGTCGAGCCCCGATATCTCCCAGGCGCTCGGCATCGGCCTGGCGGCGGTCAAGCTGCGCGTGCACCGCTCGCGGCTCTTCGTGCGCAAGCACCTGTCCGAGCATCTCGAGCCCGCGTAG
PROTEIN sequence
Length: 203
MPEALGTRVDVDAGLVEALRRDDPGAAEQLVERYGERVYRLAVRITGTSDDAEAAAQDALSRATRTIDTFKGELAFGSWIDRIAAGAAYQKLRTRRPKTGEIALDEVLPAFDGDGRHFEPMDDWSGRVDERGAQGELRRVLTDAIDALPPDYRTALVLHDVEGLSSPDISQALGIGLAAVKLRVHRSRLFVRKHLSEHLEPA*