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13_1_40cm_4_scaffold_1809_20

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(20087..21280)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 226.0
  • Bit_score: 150
  • Evalue 5.50e-33
two component system response regulator, sigma54-specific id=14627447 bin=bin7_NC10_sister species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 232.0
  • Bit_score: 142
  • Evalue 1.10e-30
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 293.0
  • Bit_score: 117
  • Evalue 1.00e-23

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGTCTCGACACCGCGAGAGCGCCCCAGTGCACGACGTGGGCGAAGGTCCGCGATCGCCCATTGCAGATCGTGCCGTCGTGCTCGTCGTCGACGATGACGCCGCAGTTCGCGACGCCCTTCATCTCACCCTGGACCGGGAATATGCGGTGATGGACGCGCCGCACGGACGGGCGGCGCTCAGCATGGTGCGCTCGGAGCGCGTTGATCTCATCCTTCTCGACATTCTCATGCCCGAGATCGATGGACTCGAGATCCTGCAAGAGCTCAAGGCGCTCGAGCCGGACCTTCCAGTCATCATGATGACTGCCGTGAAGACCGTTCGGACCACCGTGGCGGCCATGAAGCTCGGCGCGTCGGACTACCTCACGAAACCGTTCCAGGAAGAGGAGCTGCTGGCCACGATTCACCGGGCACTCGAGCAGCGCACCGGCCAGACCAGAGCGCCCGCGGATCGAGACCGGGCCGACGGCGAGGCGCAAACACTCCGGACGCACCGCCTCCTCCTGGTGGGCGGCGACCCTGGCTGGCGGGCCACCCTCGCCGTCGCGCTGGCGCGGGCGAGCAGCGTGGAGATGACCGCCACGCTCGTCGACGGGCTGAACCGCATGCTCAGATTCCGGCCGACCTGTGTGGTTCTGAACGTCGGGCGCTCGGGGGATGAGGCAGGCCGCTTCGTCGCAGCGCTGAACACCCAGCTGCCTGCGTGCCCCGTGCTCGTCGTGAGCGACGATCCCTATCTGGGCTCCGCGCACGTCTGGGAGACCCTGAACATCCGCGGCGTGCTGCGGGCGCCGGGCGGCTCCGCGGATCTGTTGAGCCGGATCGGCGCGGTGCTCCCGCCGGGCGGCAGCCTGAGCGGCCCCTGGCCGCGGCTCGGGGAATCCGTGAGTCGCACCATCGATCACCTCGCCGGTCACTTCGAAGAGGATCTGACCGTCGACGGCATCGCGCACATCATCGACATCTCCAGCAGTCACCTGGCCCACCTCTTTCGCTCGGAGATCGGCATGAGCGTGCGCGACTACCTCACCCGCGTCCGTGTGACGATCGCCCAGGATTGCCTGGCCCACACCGACGAGAAGCTCGAGTCCATCGCCGCGCGTCTGGGGTTCGCCGACACCTCGCACCTCGCCCACGTCTTCCAGCGGATCACGGGCAAACCTCCGAGCGCCTACCGACGATCCGCCAGCTGA
PROTEIN sequence
Length: 398
MSRHRESAPVHDVGEGPRSPIADRAVVLVVDDDAAVRDALHLTLDREYAVMDAPHGRAALSMVRSERVDLILLDILMPEIDGLEILQELKALEPDLPVIMMTAVKTVRTTVAAMKLGASDYLTKPFQEEELLATIHRALEQRTGQTRAPADRDRADGEAQTLRTHRLLLVGGDPGWRATLAVALARASSVEMTATLVDGLNRMLRFRPTCVVLNVGRSGDEAGRFVAALNTQLPACPVLVVSDDPYLGSAHVWETLNIRGVLRAPGGSADLLSRIGAVLPPGGSLSGPWPRLGESVSRTIDHLAGHFEEDLTVDGIAHIIDISSSHLAHLFRSEIGMSVRDYLTRVRVTIAQDCLAHTDEKLESIAARLGFADTSHLAHVFQRITGKPPSAYRRSAS*