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13_1_40cm_4_scaffold_256996_1

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(1..999)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 333.0
  • Bit_score: 297
  • Evalue 2.20e-77
RNA polymerase sigma-28 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 321.0
  • Bit_score: 344
  • Evalue 1.70e-91
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 333.0
  • Bit_score: 297
  • Evalue 6.20e-78

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 999
GACCAGCCGCCGAAAAGGGGAATACGCCGCGAAATGGTCGTGGACGAACGCCTACAAGCCCTGCTGGAGCAAGGAGAGGAGCTCGGCTGCCTCAACCTCTCCGCGATCAGCGAGTTCCTCCAGGAAGCAGATCTCGACGAAGAGCAGACGACCGGCTTCTTCGAGCAACTCGAGGAAAAGCACATCGCGCTCACCGACGACTGCGCCCGCCCCGATGCCGTTGGGAGCACCTACGTCAACGGTGACCTCGCCGTTGCCACGACCGATGCGCTGCAGCTCTTCCTCAACGAGGCCGGCCGCTACAAGCTCCTCACAGCCTCCGAAGAGGTGGAGCTCGCCAAGCGCATCGAGCGCGGCGACAGGGAGGCGAAGGACCTGATGATCAACTCGAACCTCCGCCTCGTGGTGTCGATCGCGAAGAAGTACCAGGGACACGGCATCTCGCTGCTCGACCTGATCCAGGAAGGAATCATCGGCCTGATTCGCGCCGTGGAGAAGTTCGACTGGCGCCGCGGCTACAAGTTCTCGACGTACGCGACCTGGTGGATCCGCCAGGCGGTGCAGCGCGGTGTTGCGAACAAGTCGCGCACGATCCGCATCCCCGTCCACATCGTCGAGCGCGAGCAGAAGATGTCGCGCGCCGAGCGCGCACTGATGACCCAGCTCGAGCGTGACCCCACTGACGAGGAGGTCGCGGAAAAGGCGAAGCTCTCGCTCAAACACGTCAAGGAAGTTCGTGCCGCCGCGCGCGCCGTCACGAGCCTCGACAAGCCGGTCGGCGCCGAGGGTGACGCCAGCTTCGGCGACCTGATCGCCGGCGAGGCGGTCGAGCCGTCCGAGGAAGTCCAAGTGAGCCTCGCCGAGGACGTCGTTCGCAGCGCGGTCGAGACGCTGCCGGAGCGCGAACGCGACGTCGTCAAGCTGCGCTACGGCATGAACGGCGATCCCGATCCGAAGTCACTCGAGGAGATCGGCCGCACACTGGGCCTGACGCGCGAA
PROTEIN sequence
Length: 333
DQPPKRGIRREMVVDERLQALLEQGEELGCLNLSAISEFLQEADLDEEQTTGFFEQLEEKHIALTDDCARPDAVGSTYVNGDLAVATTDALQLFLNEAGRYKLLTASEEVELAKRIERGDREAKDLMINSNLRLVVSIAKKYQGHGISLLDLIQEGIIGLIRAVEKFDWRRGYKFSTYATWWIRQAVQRGVANKSRTIRIPVHIVEREQKMSRAERALMTQLERDPTDEEVAEKAKLSLKHVKEVRAAARAVTSLDKPVGAEGDASFGDLIAGEAVEPSEEVQVSLAEDVVRSAVETLPERERDVVKLRYGMNGDPDPKSLEEIGRTLGLTRE