ggKbase home page

13_1_40cm_4_scaffold_2658_22

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(17950..18414)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0U3_HALOH similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 138.0
  • Bit_score: 169
  • Evalue 3.20e-39
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 138.0
  • Bit_score: 169
  • Evalue 9.00e-40
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.; similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 138.0
  • Bit_score: 169
  • Evalue 4.50e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothermothrix orenii → Halothermothrix → Halanaerobiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAGTAAACAGAAGACGTGGACGGCGAAAGCCGCGGACTTGAAGAGTGATTGGTTTGTGGTCGATGCCACGGATCAGGTTTTAGGTCGCCTGGCGAGCAGCGTGGCCAAGATCCTGCGCGGCAAGCACAAGCCCACGTTCACCCCGCACCTGAACACCGGAGACCACGTGGTCGTGATCAACGCCGCCAAGGTCAAGGTGAGCGGCGCCAAGCTCCTGGGCAAGGAGTACACGCGGTACACCGGTTACCCGGGCGGGCTGCGCAAGCGCACGCTCCAGAAGTCGCAGGAGATCGACCCGACGTTCCCGATCACCAACGCGGTTCGCGGGATGCTGCAGCGGAACACGCTCGGGGCCGACATGTTGAAGCGACTCCGCGTCTACGCCGGTCCCGACCACGGGCACGTCGCGCAGAAGCCCAAGGTTGTCACGTTCGATTCCAGAGGGGACATCAAGATTGGCTGA
PROTEIN sequence
Length: 155
MSKQKTWTAKAADLKSDWFVVDATDQVLGRLASSVAKILRGKHKPTFTPHLNTGDHVVVINAAKVKVSGAKLLGKEYTRYTGYPGGLRKRTLQKSQEIDPTFPITNAVRGMLQRNTLGADMLKRLRVYAGPDHGHVAQKPKVVTFDSRGDIKIG*