ggKbase home page

13_1_40cm_4_scaffold_2820_11

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 7513..10188

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=24540626 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 815.0
  • Bit_score: 1473
  • Evalue 0.0
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 831.0
  • Bit_score: 1367
  • Evalue 0.0
formate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 834.0
  • Bit_score: 779
  • Evalue 8.40e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2676
ATGACGACGAACTTGATCGACATGCAGAATTCGGATGTCATCATGGCGACGTCCAATATGGCCGAGAATCACCCGGTGGGGTTCCAGTGGGTGATGAAGGCCAAGGAGCGCGGCGCGAAGCTCATCCACGTCGATCCGCGGTTCACGCGTACGAGCGCCGCGGCCGACATCCACGTGCCGATCCGGTCGGGCACGAACATCGCGTTCTTCGGCGGCCTCATCAATTACGCGATCCAGCACAACCTCTACTTCAAGGACTACGTCGTCCACTACACCAACGCGCCGTTCCTGATCGACCCCGCGTTCAAGACGGCGACAGACGGCAACGGGCTCTTCACCGGTTTCGATCCGGCGAAAGGGGCCTACGACCGGACCTCCTGGAAGTACCAGCTCGACGGCGAGGGCAATCCCAAGCGCGACCCGACGCTCCGGGATCCCAACTCCGTCTTCCAGCTCATGAAGCGGCACTACAGCCGGTACACGTCCCAGATGGTGGAGCGCGTGTGCGGCATCCCGCAGGCGAAGTTCGAGGAGGTCGCCAAGCTCTTCTGCTCCAACTCGGGGCCGGAGAAGACTGGAACCATCACCTACGCCCTCAACCTCACGCAGCACACCAACGGCGTGGAGAACATCCGCGCGCTCTGCATGCTGCAGCTCCTGCTCGGGAACATCGGCCGGCCCGGTGGCGGTGTCACCGCGCTCCGCGGGCACGCCAACGTCCAGGGGGCCACGGACCTGGAGCTTCTCTATCACGAGCTACCCGGGTACATGGCGCAGCCGCTGCGAGACGCCCATCCCGACCTCAATGCGTACATGGAGAAGGAGACGCCGAAGGGCGGGTTCTGGGTCAACAAGCCCAAGTTCTTCGTGAGCCTGCTCAAGGCCTTTTACGGCGACGCCGCGACGAAGGACAACGAGTTCGGCTACCAATGGCTGCCCAAGCGTGCCAAGGCAGACGCCTACAGCCACCAGCACATCTTCGTGGACATGTACAACGGGGGGATCAAGGGGTTCCTCGCCCTCGGCCAGAACCCCGCGGTCGGCGGCCCCAACGCCAAGCTCGCCCGCACCGCCATGCAGCGCCTCGACTGGCTCGTCGTCAAGGACATCTTCCTGACCGAGACGGCCGAGGTGTGGAAGGCGCCGGGCACCGATCCCAAGAACGTCAAGACCGAGGTCTTCTTCATGCCGGCGGCGCCGGCCGCCGAGAAGGACGGGTCGCTGACGAACACGATGCGGCTGATCCAGTGGCACGAACGGGCGGCGAGCCCGCCCGGGGACGTCACCTCGGACGCCGAGTTCGTGTGCACGCTCGCGCAGCGGCTCCAGAAGCTCTACGTCGGCTCCAAGAAGGAGCGGGACAAGGGATTCCTCGCGGCGAGCTTCAAGTACGGAGACAACCCCAAAGAGCCGGACATGGTCGAGGTGCTCAAGGAGATCAACGGCTACGCGACCGAGGACATCACCGACAAGGACGGCAAGCCCGTCTACCGGAAGGGCCAGCCGCTCAACACCTTCGCGCACATGACCGACGACGGCAAGACGGCCGGAGGCTGCTGGATCTACACCGGCGTCACCGTCGAAGGCCCGGACGGCAAGCTCGTCAACAAGGCGAACTCGCGGAAGCCGGCCGACGACAACGACTATCTGGGGCACGGCTGGGGATTCGCGTGGCCGGCCAACCGGCGCATCCTGTATAACCGGGCGGCCGCCGACCCCGCCGGTAAGCCGTGGAGCGAGAAAAAGAAGCTCATCTGGTGGGACGCCGAGGCGCCCGCCAACGGGCCCGACAAGAAGGGCAAGTGGGTCGGCCTGGACGTGCCGGACTTCAACCCCTTCCTCGCGCCCGACGCCAAGAACGGCGACAAGCCCTTCATCATGCGCACGGACCTGGTGGGCGGCTTCTTCGGCCCCCTGAACGACGGCCCGTTTCCTGAGCACTACGAGCCGATCGAGTCGCCGGTCAAGAATCTGCTGTCGAAGCAGCAGAACAACCCCGTGGCGAAGATCTGGAAGGTGCCGGACCAGAAGAACGAGCTGGCGGCGGTCGGGTCGCCCGACTATCCCTACGTCATCACGACGTACCGCCTGACCGAACACCATCTGTCGGGCGTCATGTCCCGCTACCTGCCGATGCTGGCCGAGCTGCACTACTCGCACTTCACCGAGATCAGCCACGAGCTGGCGGCCGAGCTCAGCCTCAAGAACGGCGACATGGTGACGGTCTCCACGCCGCGAGGCAAGATCCACGTGCGCGCCATGGTGACGCACCGGTTCAAGCCGTTCATCATCGACGGCAAGACGGTGCACCAGATCGGGGTGCCCTGGCACTGGGGCTACAACGGCATCGAACAGCTGCCCGGTAGCAAGGGCGACATCACCAACGACCTCTCGGCGACTGTCGGAGACCCCAACGTCTACATCCAGGAGACGAAAGCCTTCGTCTGGACACGTCGCTGTGCATCGGCTGCCGGGCGTGTCAGGTCGCGTGCAAGCAGTGGAACGAGCTCGGCCTGGAGGTACCGGAGTGGACCGGGACCTATCAGAACCACGCCCACTTCACGGACAAGACCTTCCGGCTCGTGCGCTTCATCGAGGAGCCCAAGCCCACCGGCGACCTGGCGTGGCTGCTCATGTCCGACGTGTGCAAGCACTGCGCCGACGCGGGCTGCCTGA
PROTEIN sequence
Length: 892
MTTNLIDMQNSDVIMATSNMAENHPVGFQWVMKAKERGAKLIHVDPRFTRTSAAADIHVPIRSGTNIAFFGGLINYAIQHNLYFKDYVVHYTNAPFLIDPAFKTATDGNGLFTGFDPAKGAYDRTSWKYQLDGEGNPKRDPTLRDPNSVFQLMKRHYSRYTSQMVERVCGIPQAKFEEVAKLFCSNSGPEKTGTITYALNLTQHTNGVENIRALCMLQLLLGNIGRPGGGVTALRGHANVQGATDLELLYHELPGYMAQPLRDAHPDLNAYMEKETPKGGFWVNKPKFFVSLLKAFYGDAATKDNEFGYQWLPKRAKADAYSHQHIFVDMYNGGIKGFLALGQNPAVGGPNAKLARTAMQRLDWLVVKDIFLTETAEVWKAPGTDPKNVKTEVFFMPAAPAAEKDGSLTNTMRLIQWHERAASPPGDVTSDAEFVCTLAQRLQKLYVGSKKERDKGFLAASFKYGDNPKEPDMVEVLKEINGYATEDITDKDGKPVYRKGQPLNTFAHMTDDGKTAGGCWIYTGVTVEGPDGKLVNKANSRKPADDNDYLGHGWGFAWPANRRILYNRAAADPAGKPWSEKKKLIWWDAEAPANGPDKKGKWVGLDVPDFNPFLAPDAKNGDKPFIMRTDLVGGFFGPLNDGPFPEHYEPIESPVKNLLSKQQNNPVAKIWKVPDQKNELAAVGSPDYPYVITTYRLTEHHLSGVMSRYLPMLAELHYSHFTEISHELAAELSLKNGDMVTVSTPRGKIHVRAMVTHRFKPFIIDGKTVHQIGVPWHWGYNGIEQLPGSKGDITNDLSATVGDPNVYIQETKAFVWTRRCASAAGRVRSRASSGTSSAWRYRSGPGPIRTTPTSRTRPSGSCASSRSPSPPATWRGCSCPTCASTAPTRAA*