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13_1_40cm_4_scaffold_2979_10

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(6852..7832)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Streptomyces griseocarneus RepID=Q06384_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 269.0
  • Bit_score: 188
  • Evalue 8.20e-45
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=51201 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseocarneus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 269.0
  • Bit_score: 188
  • Evalue 1.20e-44
RNA polymerase sigma factor WhiG similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 257.0
  • Bit_score: 182
  • Evalue 1.70e-43

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Taxonomy

Streptomyces griseocarneus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCTGCGAGCTCTCTCCACCGGCGTCACCGACCGCCGGACGAATCAGGAACCGCCCGACGTCATCGGCAACAACATCGCGAACATCAACACCACGGGCGCCAAGGGCTCGCGGGCGGAATTTGCCGACCTGCTGTCGCAGAACTCCTGCCCTCGCACAGCATCCCGCTGGCCGTTCCAGTCCGCCGGTAAGGCGGTTCGCCCCGAGGCCGTCGAGGCCGCGTGGAAGGAGTACCGCGCCACCGGCTCGCCGGAGGCGCGCGAGACGCTCATGCAGCGTTACATCCATCTCGTGCGCTACATGGCCGGGCGGCTCGGCCGCACGCTGCCGCCGAGCGTCGAGTACGACGACCTCGTCTCGACGGGCGTCGTCGGCTTCCTGGGCGCGCTCGACACGTTCGATCCCAAGCACGGCACCGACTTCAGCGTGTATGCGCTCACGCGCATCCGCGGCTCGATGGTGGACTTCCTGCGCGAGATCGATCCCATCGGCCGGAAGACGCGCCGCAAGCTGCGCGAGGTGGAACGGACCCTGGCCGACCTCGAGCAGGAGATGTCGCGTCCGCCCTCGGACAGCGAGGCGGCCGCGCGACTCGGCATCTCGATGGACAACTATCACGAGCTGCTGAGCCAGGCCACGGCGGCGATGACGCTCTCGCTCGAGCGGGTGGAGAGCGAGGGCGACGACGGCGGTGAACCCGTGACGCGCGCCCGGATCCCCGATCCCGCGACTAAGGACCCGCTCGCTTCGTTGATGGACAAGGACAGCGTGGGCCGGCTGGCCTCGCTGGTGGGAGCACTCTCGCCGGCCCAGCAGCTCGCGCTTCACCTGCACTACGTCGAGGAGCTGAACTTCCGCGAGATCGCCATGGTAATTGACATCTCGGCGTCGCGGGCGACGCAACTCCACTCGGCGGCGGTGCTGGCGCTGCGCGGCCAGGCCAAGACTGGTCGGCTTCAGCCGGCGGCGGGGCCGCGATAA
PROTEIN sequence
Length: 327
MLRALSTGVTDRRTNQEPPDVIGNNIANINTTGAKGSRAEFADLLSQNSCPRTASRWPFQSAGKAVRPEAVEAAWKEYRATGSPEARETLMQRYIHLVRYMAGRLGRTLPPSVEYDDLVSTGVVGFLGALDTFDPKHGTDFSVYALTRIRGSMVDFLREIDPIGRKTRRKLREVERTLADLEQEMSRPPSDSEAAARLGISMDNYHELLSQATAAMTLSLERVESEGDDGGEPVTRARIPDPATKDPLASLMDKDSVGRLASLVGALSPAQQLALHLHYVEELNFREIAMVIDISASRATQLHSAAVLALRGQAKTGRLQPAAGPR*