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13_1_40cm_4_scaffold_3021_23

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(20419..21000)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554911 bin=CNBR_ACIDO species=Meganema perideroedes genus=Meganema taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 161.0
  • Bit_score: 85
  • Evalue 5.80e-14
RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 179.0
  • Bit_score: 84
  • Evalue 1.40e-13
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 176.0
  • Bit_score: 73
  • Evalue 6.40e-11

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Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 582
GTGCTGTCCGGTTTGAGCGAGCCCTTGCGTAGTGTTCATGTGGCCGACACCAGTGTGCTGCTGGGCTCCCGTGCCAGCATCGCCCCGGTGACCCCGGAGGAGCTGTGCGCGCTCTACGCGGAAAGGGTGTGTCGGTACGCGGCCGTCGTCGCCGGCCGGGATGGGGATCCCGACGACATCGCGCAAGACGCGCTGTTGAAGGCGATCACGAAGCTTGATCAGTTCGATCCGCGGCGTGGCTCGATGGAAGGTTGGCTGTGGCGCATCGTCGCGAACACAGCGAAGGACGCGACACGGCGAGCTCGCCTCCGTGCACTCCTGACGGAGCGGCTCGGGCGCCGCGAGCCCGTGGTCATTGACCTCGAGGATGTCGCGATCGAACGGCTCTCGGCGAGGGAGCTGCTGGAGGCCATGGCGCGCCTCTCTCCTCGTGACCGCCAGCTGCTCGGCCTCCGCTTCGTCGCGGACCTCGATACGGAATCGGTCGGAGAAATCGTCGGGTTGAGTGCCGAGTCCGCTCGCCGCGCGGTTGGCCGGGCGCTCGCGCGACTACGCGGTGTCCTGGGTGGAGGTGTGAGATGA
PROTEIN sequence
Length: 194
VLSGLSEPLRSVHVADTSVLLGSRASIAPVTPEELCALYAERVCRYAAVVAGRDGDPDDIAQDALLKAITKLDQFDPRRGSMEGWLWRIVANTAKDATRRARLRALLTERLGRREPVVIDLEDVAIERLSARELLEAMARLSPRDRQLLGLRFVADLDTESVGEIVGLSAESARRAVGRALARLRGVLGGGVR*