ggKbase home page

13_1_40cm_4_scaffold_307892_1

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(1569..1829)

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 86.0
  • Bit_score: 103
  • Evalue 1.30e-19
Probable ribonuclease VapC id=2184150 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 83.0
  • Bit_score: 77
  • Evalue 9.30e-12
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 86.0
  • Bit_score: 68
  • Evalue 9.20e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 261
CTAACCCTTCTGAAGGATAAGTGCGGGTCTGAGGTAGCCATCTCTTTCCGTCAGGACCTTGAAGCGTTCAAGACGGTGAGGATTCTATGGGTCGACGAGGAGGATGAGGCGAAGGCATGGAGAATTTTCAAAACCCACAAGGACAAAACCTACGGCTTTACCGATTGCACCAGCTTCGCCCTGATGGAAGAGAACGCCATCAAGAACGTCTTTGCGTACGACAGACACTTTGCACAGCACGGACTCAACAAACTTCCATGA
PROTEIN sequence
Length: 87
LTLLKDKCGSEVAISFRQDLEAFKTVRILWVDEEDEAKAWRIFKTHKDKTYGFTDCTSFALMEENAIKNVFAYDRHFAQHGLNKLP*