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13_1_40cm_4_scaffold_3350_12

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(13488..14000)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X012_PROPF similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 174.0
  • Bit_score: 136
  • Evalue 3.30e-29
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 5.30e-33
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 169.0
  • Bit_score: 137
  • Evalue 3.20e-30

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Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 513
ATGATGGATGAGGGACTGGCGAGCGAGGCGCTGGGCCACGTGGACGCGCTCCACAGGCTCGCGCGCTACCTCACGGGCCGCGACGCCGAGGCCGAAGACCTCGTGCAGGAGACGTACGCGCGCGCCGTGGCCGGCGCCGACGGCTTCACGCCGGGCACGAATCTCAAGGCGTGGCTGTTCCGGATCTTGAGGAACACCTTCATCAGCCTGTACCGCCGGCGGCGCGCGAGCCCCGAGGTGAGCGGCGTCGACGTGTCGGAGGCGGCGGCGAGCGAGGAGTGGCTGCGCGACGATCTCGAGCTGGACCGGCTGCGCAAGGTCGTGGGCGAGGAGATCGAAGCCGCGCTGATGACGCTCTCGGAGGAGGCGCGCACGGTGGTGCTGCTGGACCTGGAAGACCTGACCGAGGTGGAGATCGCGGCGGTGCTCGAGTGTCCCGTCGGGACCGTGAAGTCGCGCCTGGCCCGGGCGCGCGCGGCGCTGCGGCGCCGGCTGCGCGACTACGCGCGATGA
PROTEIN sequence
Length: 171
MMDEGLASEALGHVDALHRLARYLTGRDAEAEDLVQETYARAVAGADGFTPGTNLKAWLFRILRNTFISLYRRRRASPEVSGVDVSEAAASEEWLRDDLELDRLRKVVGEEIEAALMTLSEEARTVVLLDLEDLTEVEIAAVLECPVGTVKSRLARARAALRRRLRDYAR*