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13_1_40cm_4_scaffold_52_7

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(6467..7132)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AW11_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 183.0
  • Bit_score: 139
  • Evalue 3.90e-30
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 143
  • Evalue 3.80e-31
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 183.0
  • Bit_score: 139
  • Evalue 1.10e-30

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 666
ATGAAGACGGAACGCGATCCGGCAACCGGCGACGCCCGCTCCGATCACGCTCTCGTGTACGCCGCGCGCGATGGCGACACCGTCGCATTCGACGCGCTCTTCTACCGCTACCGGGATGGGATCTTCCGCCTGGGCCTCGCGATCACGAAGGACCCGTCGGCAGCGGAGGAGATCGTCGTCGACACCTTCGCGCGCGCGCACCGAGCACTCGCCCGTCTCGAGCCGGACGATTCGCTCCGTCCGTGGCTGTATCGGGTCGCGGTCAACCTGTCCTATAACCGGCGCCCCCGCAAGAACGTGGTCCTGTCATCGCTCGACGAGGCCGCCGACGAGGCAGTTGCTAACGATGACGGTTCGCCCTCGCATGTTGCTGAGAAGGCGGAGCTCCGTCGGCTCGTGCTGGGGGCGGTCGAGCAGCTCGGACCCAAACACCGGCTTGTCGTGGTCCTCCACTACCTGAACGGGCTGAACCTGACGGAGATCGCCGAGGTCGTGGACTGCCCGGTCGGGACGGTGAAATCCCGCCTGCACTACGCGCTGCGCCGTCTCCGAACGCATCTTGCGGCACACCCGGAGCTCGGCATCGAACCACCTCGGTCGCTTCTGGCTACTGGTTTTCGGGCACCTAAGCCGGTCACGGCACCTCTGCCCCTCGAGGACAAATGA
PROTEIN sequence
Length: 222
MKTERDPATGDARSDHALVYAARDGDTVAFDALFYRYRDGIFRLGLAITKDPSAAEEIVVDTFARAHRALARLEPDDSLRPWLYRVAVNLSYNRRPRKNVVLSSLDEAADEAVANDDGSPSHVAEKAELRRLVLGAVEQLGPKHRLVVVLHYLNGLNLTEIAEVVDCPVGTVKSRLHYALRRLRTHLAAHPELGIEPPRSLLATGFRAPKPVTAPLPLEDK*