ggKbase home page

13_1_40cm_2_scaffold_1215_19

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(16988..17875)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 286.0
  • Bit_score: 321
  • Evalue 7.40e-85
  • rbh
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Chloroflexi_68_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 284.0
  • Bit_score: 326
  • Evalue 5.50e-86
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 286.0
  • Bit_score: 321
  • Evalue 2.10e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_68_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 888
ATGCTCGAGCGCCCGTCGGAAGTCTTCGCTGAAGTGCGCCCCATCCTGTTCTCCATCGCCTACCGGATGCTCGGCAGCGTGATGGACGCAGAGGATGTGGTTCAGGAAGCGTACCTGCGCTGGCAGGAGGCATCCGATGACGACGTGCGCTCGCCGCGGGCCTACCTCGCAACCATCGTCACGCGGCTGTGCATCAACCAGCTGCGCTCGGCCCGGGTGCAGCGCGAAGTCTATGTCGGGCCCTGGCTGCCGGAGCCGCTCGTGACCGACCACACCCCTGATCCGTCGGCCTCCGTCGAGCTCGCCGAGTCGCTGTCGATGGCCTTCCTCGTCCTGCTCGAACGGTTGTCGCCGACCGAGCGGGCGGTGTTCCTGCTGCGCGAGGTGTTCGACTTCGACTATCACGAGATCGCTCGCATCGTGGATAAGAGCGCAGCGAACTGTCGCCAGCTCTTCGCCCGCGCGAAGCAGCATGTCGGCACTTCCCGCGCGCGCTTCCCGGCGAAACCCGAGCAGGCCGAGCGACTGATGGAGCGCTTCACTCAGGCGGCCGGCGCCGGCGACGTCGACGGGCTGCTCGCCGTGCTGGCGGAGGACATCACTCTCTGGGCGGACGGCGGTGGCAAGGCCCCGGGAGCGGCCCTCAAGCCGGTGCACGGAGCGGTCGGTGTCGCCCGGTTCGTCATCGGCATCGTGCGCCGCGTGGTCCCGGCCGAGGCCGTTGTCCGGCCTGCCGAGATCAACGGACAGCCGGGCTTCATCGCCTACGTCGCCGGCCGGCCTCTGGCGGCGCTCGTCTTCGACATCCGGGGCGACCGGATTCACACCATCTACGTCATGGGCAACCCGGACAAGCTCCAGACGCTGCCGTCTCCGGAGCAGAGATGA
PROTEIN sequence
Length: 296
MLERPSEVFAEVRPILFSIAYRMLGSVMDAEDVVQEAYLRWQEASDDDVRSPRAYLATIVTRLCINQLRSARVQREVYVGPWLPEPLVTDHTPDPSASVELAESLSMAFLVLLERLSPTERAVFLLREVFDFDYHEIARIVDKSAANCRQLFARAKQHVGTSRARFPAKPEQAERLMERFTQAAGAGDVDGLLAVLAEDITLWADGGGKAPGAALKPVHGAVGVARFVIGIVRRVVPAEAVVRPAEINGQPGFIAYVAGRPLAALVFDIRGDRIHTIYVMGNPDKLQTLPSPEQR*