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13_1_40cm_2_scaffold_12807_16

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(11119..11487)

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase, sigma 54/sigma 60 factor; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 122.0
  • Bit_score: 208
  • Evalue 5.30e-51
RNA polymerase sigma-54 factor id=1759808 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 123.0
  • Bit_score: 207
  • Evalue 1.10e-50
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 118.0
  • Bit_score: 164
  • Evalue 2.30e-38

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Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGACCCAGCTGAAACCTATGGTGTTGAGAGATGTGGCTGAGAGTATCGGCATGCATGAATCGACCGTGAGCCGAGCCACTGCGAACAAGTATGTCCATACCCCGCAGGGGCTCTTCGAGCTCAAGTTTTTCTTCCAGAGCGGTCTGAAGAGCGGGAATCACGGGGATGTCGCTTCTGAGAGCGTGAAGGAGAAGATCCGCTCGATCATCTCGACAGAGGACCCGAGGAAACCCTACAGCGACCAGCAGATCGCCGGCTTTCTGGGCCAGGAGTTGATCGACATTGCCCGGCGCACCGTCGCCAAATACCGCGAAGCTATGGGAATCCTTCCCTCTTCCAGGCGGCGCCAGCCTTACCTCAGGAAGTAG
PROTEIN sequence
Length: 123
VTQLKPMVLRDVAESIGMHESTVSRATANKYVHTPQGLFELKFFFQSGLKSGNHGDVASESVKEKIRSIISTEDPRKPYSDQQIAGFLGQELIDIARRTVAKYREAMGILPSSRRRQPYLRK*