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13_1_40cm_2_scaffold_1305_18

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(14678..15955)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 427.0
  • Bit_score: 596
  • Evalue 2.20e-167
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 418.0
  • Bit_score: 643
  • Evalue 2.20e-181
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 424.0
  • Bit_score: 596
  • Evalue 6.30e-168

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
GTGACGGCGACCGATCCAGTGCATGAGACGGTGAATGCCGTCTATTTCTCCGATTCCCGCCGCGTGCTCGCCACGCTGATCCGCCTGCTGGGCGACTTTGACGCCGCCGAGGAAGCGCTGCACGATGCCTTCAGGGCAGCGCTGGAGCAGTGGCCGCGCGACGGCGTGCCCGCCAATCCTCGCGCGTGGCTGGTGTCCACCGCACGGTTCAAGGCGATCGATGGGATGCGCCGGCGCGCGCGTTTTGACGCGCTCGACGACGTCGGCGACAAAGCGGACATCGCCGTCGTCGACCCCGCGGCGTGGGCCGACGAAGAGAGCGTCGAAGACGATCGATTGCGCCTCATCTTCACGTGTTGCCACCCGGCCATGTCGCCTGATGCGCAGGTGGCGCTCACGCTGCGCGAAGTGTGCGGGCTGACGACGGAGGAGATTGCGCAGGCGTTTCTCACGCCGGCGCCCACGCTGGCGCAACGGATCGTGCGCGCGAAGGCCAAAATCCGCGACGCGCGGATTCCATATGAGGTGCCGGCGCGGGCCGAGTTGGCGGAAAGACTCGACGCCGTGCTGCGCGTCATTTATCTCGTGTTCAACGAGGGCTATGCGGCGTCGTCGGGCTCGTTGTTGACGCGGCACGATCTGTCCGCTGAGGCGATCCGTTTGGAGCGGCTGCTCGTCGCGTTGCTGCCGGAGCCGGAGGCCATTGGACTGCTGGCGCTGATGCTGCTGCAGGATTCGCGGCGCGCAGCGCGCACCTCGCCGTCAGGCGACGTGATCCTGCTCGACGATCAGGATCGCTCGCTGTGGGACCGGAACCAGATCGCGGAGGGGATCAAGCTGGTCGAGCAGGCGCTGTGGTTGCGGCCTGCCCTGAGCGAGCGCAAGCGAGTCGAACGGCGGTTCGGCCCGTACACGATTCAGGCCGCAATCGCGGCCCTGCACGCCGAGGCGCCCAGCGCCGCGGCGACGGATTGGGCGGAGATCGTTGGCCTCTACGACGTATTGGCGCGTGCGGATCCGTCCCCCGTCATCGAGCTGAACCGGGCGGTGGCCGTGGCGATGCGCGACGGCCCGGCGGCGGGTCTGGCGCTCGTCGACGCCATCCTCGAGCGTGAAGATCTGTTGGACTACCGCCTCGCGCACGCCGCACGGGCGGACCTGTGCCGGCGGTTGGGAAAAACAGCGGACGCGCGCGCCTCGTATGAGCGCGCCCTCGCCCTGACCCGGCAGGCGCCGGAGCGTCGGTTTCTGGAGCGCCGGCTGGCGGAGCTTCGTTAG
PROTEIN sequence
Length: 426
VTATDPVHETVNAVYFSDSRRVLATLIRLLGDFDAAEEALHDAFRAALEQWPRDGVPANPRAWLVSTARFKAIDGMRRRARFDALDDVGDKADIAVVDPAAWADEESVEDDRLRLIFTCCHPAMSPDAQVALTLREVCGLTTEEIAQAFLTPAPTLAQRIVRAKAKIRDARIPYEVPARAELAERLDAVLRVIYLVFNEGYAASSGSLLTRHDLSAEAIRLERLLVALLPEPEAIGLLALMLLQDSRRAARTSPSGDVILLDDQDRSLWDRNQIAEGIKLVEQALWLRPALSERKRVERRFGPYTIQAAIAALHAEAPSAAATDWAEIVGLYDVLARADPSPVIELNRAVAVAMRDGPAAGLALVDAILEREDLLDYRLAHAARADLCRRLGKTADARASYERALALTRQAPERRFLERRLAELR*