ggKbase home page

13_1_40cm_2_scaffold_237_19

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(26716..27645)

Top 3 Functional Annotations

Value Algorithm Source
Intein/rRNA intron-related DNA endonuclease n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JGJ5_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 31.4
  • Coverage: 315.0
  • Bit_score: 130
  • Evalue 2.50e-27
intein/rRNA intron-related DNA endonuclease similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 315.0
  • Bit_score: 130
  • Evalue 7.10e-28
Intein/rRNA intron-related DNA endonuclease {ECO:0000313|EMBL:BAD85439.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococc similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 315.0
  • Bit_score: 130
  • Evalue 3.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermococcus kodakarensis → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 930
ATGCCAAAAAGACTGCAAAACCTATCTCTCGACGCTCGTGCCAGAGCATATGTCAGAGTTCTCCGGCTGAGCCACGATCGCGGATTCACTTGCAACGCCATTGCAAAGCAACTAGATTTGCCCGTTTCGACAGTTTACAACTGGATTGTAGGCAAGAATTCGCCATTAGGGAGTTTCATCGTCCCGATTCTAACGCCATCCCCATCATTGAGCTACCTTGCAGGCGCTATGCTCGGCGACGGTGATCTGTCACGGAGTGCCTCGTACCACTATCAACTTCGGTTAAGAGTGAGGGACCGAGATTTCGCCGAAGAAGTCTGCTCCTGCTTTAGCTCAGTCCTTGGGAGGCCGAAGAAGATTAGGAACGACAGTAGTGGGTTCTATATAGTTAGAGTTTGGAGTCGCATTCTCTACGAATACCTCTCAGATACCAGTGCCATTCGGAAAACCGTGGATCATTTTCCTTCTGAATTCATTAGAGGGTTTGCAGATGCGGAGGGTTCCCCTGCAATTTCCGTTGGGCAGTCCCAAAATCCATTGTTCGGCTTCTATATTGTCCTGGTGAACGCTGATGTCGATTTGCTGAAATGGATCAGACGCCTCATGAGGTTGAGATTCGGGATCGATTCTCGGTTGTTAAAGGGAAAGATGCATCCGAGTATGTGGGGTAAGGTTCCCTGTTACTACCTCAAGATCGGGCGGCGTAGGGATCAGCAGTCATTTGCTGACCGTATTGGCTTCGCCATCCGTAGGAAGCAGCGGAAAATGCTGATTGCGCTGGAACTGTTACGGAGGTTTGGTCCCTCAAAGGCTGGGGCCGAGTGGCAACGAATTTTCGAGAAGAGTGGGAGACTATGGATAATGAGGGACTCAGGCGAGAAGTTGTGGAGCCCCGGACGGGATTTGAACCCGTGGCCTTTGCCTTTTTGA
PROTEIN sequence
Length: 310
MPKRLQNLSLDARARAYVRVLRLSHDRGFTCNAIAKQLDLPVSTVYNWIVGKNSPLGSFIVPILTPSPSLSYLAGAMLGDGDLSRSASYHYQLRLRVRDRDFAEEVCSCFSSVLGRPKKIRNDSSGFYIVRVWSRILYEYLSDTSAIRKTVDHFPSEFIRGFADAEGSPAISVGQSQNPLFGFYIVLVNADVDLLKWIRRLMRLRFGIDSRLLKGKMHPSMWGKVPCYYLKIGRRRDQQSFADRIGFAIRRKQRKMLIALELLRRFGPSKAGAEWQRIFEKSGRLWIMRDSGEKLWSPGRDLNPWPLPF*