ggKbase home page

13_1_40cm_2_scaffold_5162_7

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 5778..6107

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEF5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 105.0
  • Bit_score: 123
  • Evalue 1.10e-25
sigma factor, ECF-like family protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 105.0
  • Bit_score: 123
  • Evalue 3.10e-26
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:BAH40882.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 105.0
  • Bit_score: 123
  • Evalue 1.50e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 330
ATGAAGGACGCCGGACCTGACGAGGTGACGGTGCTGCTCGCGAAGTGGCGGCAGGGCTCCGAAGACGCCCAGGAGCGGCTGATGGAGGTCGTGCAGAGCGAGCTGCGCCGCCTCGCCGCCAGCTACCTGCGACGCGAGCGCCCGGGCCACACGCTGCAGCCGACCGCGGTCGTCAACGAAGCGTATCTGCGGCTGATGCCGCAGCGCGGCGTGCGCTGGGAGAACCGCGCCCACTTCTTCGGCATCGCCGCGAAGATGATGCGGCGCGTCCTGGTCGATCACGCGCGCCGCAAACGCCACGCAACGACATCGGTAGGGGACGGTCTTTAG
PROTEIN sequence
Length: 110
MKDAGPDEVTVLLAKWRQGSEDAQERLMEVVQSELRRLAASYLRRERPGHTLQPTAVVNEAYLRLMPQRGVRWENRAHFFGIAAKMMRRVLVDHARRKRHATTSVGDGL*