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13_1_40cm_2_scaffold_53950_2

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(105..1910)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 600.0
  • Bit_score: 807
  • Evalue 9.00e-231
rpoD; RNA polymerase sigma factor RpoD (Sigma-70); K03086 RNA polymerase primary sigma factor Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 613.0
  • Bit_score: 823
  • Evalue 1.70e-235
rpoD; RNA polymerase sigma factor RpoD (Sigma-70) similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 600.0
  • Bit_score: 807
  • Evalue 2.50e-231

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Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1806
GTGTCAACGCGTAAGGAAGACAAGACGGACGAAGTCAAGCGCCTGATCTCCATGGGCAAGGAGAAGGGCTTCCTCACGTACCGCGACCTCAACACGACCCTGCCCGCCGACATGGTCTCGTCTGAGCGGCTGAGCAGCCTGATGACCATGTTTGGCGAGATGGACATCGAGATCATCGATTCCCCCGAAGGGGAGCGGTACCAGCAGATGATGTCCGATGGCGAGAGCACGACGGAGGAAGCCGAAGAGGTCGGGGAGGCCGAGGAAGAGGAGAAGAAAATCGACCTGACGCCGGGCGACCTAGCCCGCACCGACGATCCGGTCCGGCTGTACCTCAAGGAGATGGGCAGCGTCTCGCTGCTCAGCCGCGAGGGGGAGATTGAGATCGCGAAGCGCATCGAGGAGGGCAAGCAGGACATCTCGACGGTGGCCCTCGGGATGCCGATGACGATCAAGGCCGTCTTCGCCCTCATCGATCAGGTCAAGGCCAACAAGGTTCCGATCCGGGAAGTGGTCTCGGCGGGCGTGGAAGAGGAGTTCGATGAAGTCGTCCAGCAAGACGACGAGGAGCTCCGCAGGCACACGCTGGAGGGCGTGCGCAAAGGCAAGGCGCTGGCCAAGGGGCTGCTTGCGCTTTACGCCCGGAACCGGAAGCCCAACCTGAGCCCGGCGAAGCGGAAAGAGATCAAGACCAAGCTCAACGATGCCCGCCGCCAGGTCGCGGAGAAGCTGGACAGCCTGAACCTCCATCCGGTCCAGCGCGAGCGCCTGATCCAGCGGGTGCGGGATCTCGCGCAGGAGATCGCGGCCTGCGAGCGCGAGCTCGCGTACTGCCGGCGCCGGCTCGGCGTGGCGGGCGAGGAAGGCACCGCCCTGCTCCTCAAGCTGAGCCGCGGGCGGCAGGGGCTCATCGCGGTCCGCCGCAAGACCAGCGTTCCCATGGATGTCCTTCACGAGATCGAGAAGGCCGCCCAGAACGCGCGGCGCCGCATCCGGGGCATCGAGGCCGAGTCCCTGGTTCCCGCCGAGGAGCTCCGCGAGAGCGTCAAGCTGTTGGACCAGGCTGAGGAGAAGGTCAAGCGCGGCAAGGCCGAGCTGGTCGAGGCCAACCTGCGCCTCGTGGTCAGCATCGCCAAGAAGTACACCAACCGCGGCCTCCAGTTCCTGGACCTGATCCAGGAGGGGAACATCGGACTCATGAAGGCCGTGGACAAGTTCGAGTACAAGCGGGGCTACAAGTTCAGCACCTACGCGACCTGGTGGATCCGCCAGGCCATCACCCGCGCCATCGCCGACCAGGCCCGGACCATCCGGATCCCGGTGCACATGATCGAGACCATCAACAAGCTGATCCGCACCTCACGGCACCTGGTCCAGAAGCTGGGACGCGAGCCCTCGCCTGAAGAGATCGCCGAGAAAATGGACCTCCCGCTGGACAAGGTCCGCAAGATCCTCAAGATCGCCAAGGAGCCGATCTCGCTGGAGACGCCCATCGGCGAGGAGGAGGACAGCCACCTGGGGGACTTCATCGAGGACAAGAAGGCCATCTCGCCACTGGACGCAGCCATCCGTTACGACCTGCAGCGCCAGATCAACAACGCGCTGAAGACCCTCACGCCGCGCGAGGAGCGCGTCCTGCGTAAGCGCTTTGGGATCGGCGAGAACACCGACCACACGCTGGAAGAGGTTGGACAGGACTTCGCCGTCACGCGGGAGCGCATCCGGCAGATCGAGGCCAAGGCGCTGCGCAAGCTGCGTCACCCGAGCCGGAGCAAGAAGCTGCGGAGCTTCGTGGAGAGCCTGTGA
PROTEIN sequence
Length: 602
VSTRKEDKTDEVKRLISMGKEKGFLTYRDLNTTLPADMVSSERLSSLMTMFGEMDIEIIDSPEGERYQQMMSDGESTTEEAEEVGEAEEEEKKIDLTPGDLARTDDPVRLYLKEMGSVSLLSREGEIEIAKRIEEGKQDISTVALGMPMTIKAVFALIDQVKANKVPIREVVSAGVEEEFDEVVQQDDEELRRHTLEGVRKGKALAKGLLALYARNRKPNLSPAKRKEIKTKLNDARRQVAEKLDSLNLHPVQRERLIQRVRDLAQEIAACERELAYCRRRLGVAGEEGTALLLKLSRGRQGLIAVRRKTSVPMDVLHEIEKAAQNARRRIRGIEAESLVPAEELRESVKLLDQAEEKVKRGKAELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRHLVQKLGREPSPEEIAEKMDLPLDKVRKILKIAKEPISLETPIGEEEDSHLGDFIEDKKAISPLDAAIRYDLQRQINNALKTLTPREERVLRKRFGIGENTDHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRSKKLRSFVESL*