ggKbase home page

13_1_40cm_2_scaffold_76_1

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 1..813

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 289.0
  • Bit_score: 227
  • Evalue 2.30e-56
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 289.0
  • Bit_score: 227
  • Evalue 3.20e-56
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 273.0
  • Bit_score: 152
  • Evalue 2.00e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 813
GGTGGCACGGTCATCCTGAAGATCGCGAACCTCGACACGGTGCAGGTCTCGGCGCTCGTGGATGAGACCGACGTCGGCAAGGTGCGGGCCGGTATGCCGGTGACGATCACCGTCGACGCATACGCGAACCGGCGGTTCGACGGCCGCGTCTTGAAGATCGAGCCGCAGGCGCAGGTCAACCAGAACGTCACCATGTTCCCGGTCGACGTGAACATCTTGAACCCGGACCACCTGCTCAAGCCGGGGATGAACACCGAGGTGGAAATCCACATCGGGCAGCGCCAGGGGGTGCTGGCCGTGCCGAACGCCGCGCTGCGGACCCCGCGCGACGTCGGCTCGGCGGCCAACGTGCTGGGCCTCGATTCCACGACTGTCCAGCGCGAGCTCGCCGCCGCGCCGGCGACGCCAGGGCCACGGGCCGGCGCGGACACGGCCTTGAGCGACGGCGGCAAGCTGCACGCGGCGGAGCCGCCCAAGGGAGGCGCGACGTTCACGACGCGCGACGGCCGGACGATCACCCTCCCGCCGGGTGTGACGTCCGAGCAGGTGCGGGCGGCGTTCGGCAAGATGCGCGACGGCGGCACGCTCACGCCCGCGGAGCAGGCGCTGCTGGCCCAGCTGCGCGGGCAGTTCCAGCAGTCCTCTCCCGGCGGCGGCACGACCGGCAGCTACATCGTGTTCGCGCGGCGCGGCGGTAGGATCGCACCGGTCCCGATCCAGACCGGCCTCACCGATCAAGACTACATCGAGGTGACGGGCGGCGTGACCGAGGGCGACACCGTGCTCGTGCTGTCGAGCGGCCCGACGAGGTAA
PROTEIN sequence
Length: 271
GGTVILKIANLDTVQVSALVDETDVGKVRAGMPVTITVDAYANRRFDGRVLKIEPQAQVNQNVTMFPVDVNILNPDHLLKPGMNTEVEIHIGQRQGVLAVPNAALRTPRDVGSAANVLGLDSTTVQRELAAAPATPGPRAGADTALSDGGKLHAAEPPKGGATFTTRDGRTITLPPGVTSEQVRAAFGKMRDGGTLTPAEQALLAQLRGQFQQSSPGGGTTGSYIVFARRGGRIAPVPIQTGLTDQDYIEVTGGVTEGDTVLVLSSGPTR*