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CARPRO_7_140 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
sigma subunit rbh KEGG
DB: KEGG
99.8 452.0 891 1.30e-256 pra:PALO_08925
sigma subunit similarity KEGG
DB: KEGG
99.8 452.0 891 1.30e-256 pra:PALO_08925
Sigma-70, region 4 n=4 Tax=Propionibacterium RepID=E4AI38_PROAA (db=UNIREF evalue=0.0 bit_score=711.0 identity=78.98 coverage=99.5584988962472) similarity UNIREF
DB: UNIREF
78.98 99.56 711 0.0 pra:PALO_08925
seg (db=Seg db_id=seg from=175 to=194) iprscan interpro
DB: Seg
null null null null pra:PALO_08925
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192) iprscan interpro
DB: TMHMM
null null null null pra:PALO_08925
(db=HMMPfam db_id=PF10646 from=228 to=340 evalue=1.8e-13 interpro_id=IPR019606 interpro_description=GerMN domain) iprscan interpro
DB: HMMPfam
null null null 1.80e-13 pra:PALO_08925
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=55 to=120 evalue=5.5e-08 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi iprscan interpro
DB: superfamily
null null null 5.50e-08 pra:PALO_08925
(db=HMMPfam db_id=PF04545 from=67 to=114 evalue=6.2e-06 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 6.20e-06 pra:PALO_08925
(db=HMMPfam db_id=PF10648 from=361 to=439 evalue=0.00011 interpro_id=IPR018911 interpro_description=Spore germination protein-like Gmad2, immunoglobulin-like domain) iprscan interpro
DB: HMMPfam
null null null 1.10e-04 pra:PALO_08925
Uncharacterized protein {ECO:0000313|EMBL:ERS68712.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP UNIPROT
DB: UniProtKB
100.0 452.0 892 2.90e-256 U7MCG1_9ACTN
Sigma factor n=3 Tax=Propionibacterium avidum RepID=G4CXX8_9ACTO similarity UNIREF
DB: UNIREF90
99.8 null 891 1.50e-256 pra:PALO_08925