| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| sigma subunit | rbh |
KEGG
DB: KEGG |
99.8 | 452.0 | 891 | 1.30e-256 | pra:PALO_08925 |
| sigma subunit | similarity |
KEGG
DB: KEGG |
99.8 | 452.0 | 891 | 1.30e-256 | pra:PALO_08925 |
| Sigma-70, region 4 n=4 Tax=Propionibacterium RepID=E4AI38_PROAA (db=UNIREF evalue=0.0 bit_score=711.0 identity=78.98 coverage=99.5584988962472) | similarity |
UNIREF
DB: UNIREF |
78.98 | 99.56 | 711 | 0.0 | pra:PALO_08925 |
| seg (db=Seg db_id=seg from=175 to=194) | iprscan |
interpro
DB: Seg |
null | null | null | null | pra:PALO_08925 |
| transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192) | iprscan |
interpro
DB: TMHMM |
null | null | null | null | pra:PALO_08925 |
| (db=HMMPfam db_id=PF10646 from=228 to=340 evalue=1.8e-13 interpro_id=IPR019606 interpro_description=GerMN domain) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-13 | pra:PALO_08925 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=55 to=120 evalue=5.5e-08 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi | iprscan |
interpro
DB: superfamily |
null | null | null | 5.50e-08 | pra:PALO_08925 |
| (db=HMMPfam db_id=PF04545 from=67 to=114 evalue=6.2e-06 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.20e-06 | pra:PALO_08925 |
| (db=HMMPfam db_id=PF10648 from=361 to=439 evalue=0.00011 interpro_id=IPR018911 interpro_description=Spore germination protein-like Gmad2, immunoglobulin-like domain) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-04 | pra:PALO_08925 |
| Uncharacterized protein {ECO:0000313|EMBL:ERS68712.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP |
UNIPROT
DB: UniProtKB |
100.0 | 452.0 | 892 | 2.90e-256 | U7MCG1_9ACTN | |
| Sigma factor n=3 Tax=Propionibacterium avidum RepID=G4CXX8_9ACTO | similarity |
UNIREF
DB: UNIREF90 |
99.8 | null | 891 | 1.50e-256 | pra:PALO_08925 |