Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpsM; 30S ribosomal protein S13 | similarity |
KEGG
DB: KEGG |
100.0 | 124.0 | 245 | 7.90e-63 | pra:PALO_01860 |
30S ribosomal protein S13 n=73 Tax=Propionibacterium RepID=RS13_PROAC (db=UNIREF evalue=2.0e-54 bit_score=214.0 identity=99.09 coverage=87.2) | similarity |
UNIREF
DB: UNIREF |
99.09 | 87.2 | 214 | 2.00e-54 | pra:PALO_01860 |
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=112 evalue=0.0 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 0.0 | pra:PALO_01860 |
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=88 to=101 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | pra:PALO_01860 |
Ribosomal_S13 (db=HMMPIR db_id=PIRSF002134 from=1 to=124 evalue=3.89999861795218e-54 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 3.90e-54 | pra:PALO_01860 |
Ribosomal_S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=123 evalue=2.90000354677981e-52) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.90e-52 | pra:PALO_01860 |
PTHR10871 (db=HMMPanther db_id=PTHR10871 from=1 to=123 evalue=2.90000354677981e-52 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.90e-52 | pra:PALO_01860 |
Bact_S13 (db=HMMTigr db_id=TIGR03631 from=3 to=115 evalue=1.5e-49 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.50e-49 | pra:PALO_01860 |
Ribosomal_H2TH (db=superfamily db_id=SSF46946 from=2 to=121 evalue=1.70000295590053e-42 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-42 | pra:PALO_01860 |
Ribosomal_S13 (db=HMMPfam db_id=PF00416 from=3 to=109 evalue=5.40000000000002e-34 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.40e-34 | pra:PALO_01860 |
G3DSA:1.10.8.50 (db=Gene3D db_id=G3DSA:1.10.8.50 from=2 to=66 evalue=2.7e-25) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.70e-25 | pra:PALO_01860 |
G3DSA:4.10.910.10 (db=Gene3D db_id=G3DSA:4.10.910.10 from=73 to=123 evalue=3.39999999999999e-23) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.40e-23 | pra:PALO_01860 |
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1203629 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium |
UNIPROT
DB: UniProtKB |
100.0 | 124.0 | 245 | 4.00e-62 | U7J554_9ACTN |