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CARPRO_8_87 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
30S ribosomal protein S4 n=73 Tax=Propionibacterium RepID=RS4_PROAC (db=UNIREF evalue=4.0e-111 bit_score=403.0 identity=97.51 coverage=99.009900990099) similarity UNIREF
DB: UNIREF
97.51 99.01 403 4.00e-111 pra:PALO_01870
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
100.0 201.0 403 3.70e-110 pra:PALO_01870
rpsD; 30S ribosomal protein S4 rbh KEGG
DB: KEGG
100.0 201.0 403 3.70e-110 pra:PALO_01870
S4 (db=ProfileScan db_id=PS50889 from=91 to=150 evalue=0.0 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 0.0 pra:PALO_01870
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=89 to=113 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
null null null 0.0 pra:PALO_01870
RpsD_bact (db=HMMTigr db_id=TIGR01017 from=3 to=201 evalue=6.40000000000004e-80 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
null null null 6.40e-80 pra:PALO_01870
PTHR11831:SF4 (db=HMMPanther db_id=PTHR11831:SF4 from=2 to=201 evalue=6.19996040581186e-78) iprscan interpro
DB: HMMPanther
null null null 6.20e-78 pra:PALO_01870
Ribosomal_S4 (db=HMMPanther db_id=PTHR11831 from=2 to=201 evalue=6.19996040581186e-78 interpro_id=IPR022801 interpro_description=Ribosomal protein S4/S9) iprscan interpro
DB: HMMPanther
null null null 6.20e-78 pra:PALO_01870
SSF55174 (db=superfamily db_id=SSF55174 from=2 to=201 evalue=4.89996723796399e-69) iprscan interpro
DB: superfamily
null null null 4.90e-69 pra:PALO_01870
G3DSA:1.10.1050.10 (db=Gene3D db_id=G3DSA:1.10.1050.10 from=3 to=99 evalue=5.10000000000004e-42 interpro_id=IPR001912 interpro_description=Ribosomal protein S4/S9, N-terminal GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: Gene3D
null null null 5.10e-42 pra:PALO_01870
G3DSA:3.10.290.10 (db=Gene3D db_id=G3DSA:3.10.290.10 from=100 to=186 evalue=3.8e-30 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: Gene3D
null null null 3.80e-30 pra:PALO_01870
S4 (db=HMMSmart db_id=SM00363 from=91 to=155 evalue=3.30000526807186e-22 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 3.30e-22 pra:PALO_01870
S4 (db=HMMPfam db_id=PF01479 from=92 to=138 evalue=7.90000000000001e-22 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 7.90e-22 pra:PALO_01870
Ribosomal_S4 (db=HMMPfam db_id=PF00163 from=2 to=90 evalue=1.1e-20 interpro_id=IPR001912 interpro_description=Ribosomal protein S4/S9, N-terminal GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
null null null 1.10e-20 pra:PALO_01870
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium s UNIPROT
DB: UniProtKB
100.0 201.0 403 1.80e-109 U7JV03_9ACTN
30S ribosomal protein S4 n=89 Tax=Propionibacterium RepID=RS4_PROAC similarity UNIREF
DB: UNIREF90
97.5 null 396 3.90e-108 pra:PALO_01870
  • SCG Annotations
  • BSCG ribosomal protein S4