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CARPRO_8_88 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh KEGG
DB: KEGG 		100.0 339.0 659 4.80e-187 pra:PALO_01875
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG 		100.0 339.0 659 4.80e-187 pra:PALO_01875
DNA-directed RNA polymerase subunit alpha n=73 Tax=Propionibacterium RepID=RPOA_PROAC (db=UNIREF evalue=6.0e-177 bit_score=623.0 identity=97.17 coverage=93.2352941176471) similarity UNIREF
DB: UNIREF 		97.17 93.24 623 6.00e-177 pra:PALO_01875
seg (db=Seg db_id=seg from=319 to=335) iprscan interpro
DB: Seg 		null null null null pra:PALO_01875
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=18 to=311 evalue=9.6e-169 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 9.60e-169 pra:PALO_01875
no description (db=HMMSmart db_id=SM00662 from=18 to=225 evalue=7.9e-87 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart 		null null null 7.90e-87 pra:PALO_01875
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=48 to=169 evalue=1.2e-44 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 1.26e-44 pra:PALO_01875
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=48 to=168 evalue=8.6e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 8.60e-41 pra:PALO_01875
RPOA_PROAC_Q6A6R1; (db=BlastProDom db_id=PD001179 from=250 to=318 evalue=2.0e-33 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: BlastProDom 		null null null 2.00e-33 pra:PALO_01875
(db=HMMPfam db_id=PF03118 from=244 to=303 evalue=1.3e-28 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 1.30e-28 pra:PALO_01875
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=4 to=226 evalue=1.8e-26 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: superfamily 		null null null 1.80e-26 pra:PALO_01875
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=240 to=323 evalue=6.8e-26) iprscan interpro
DB: Gene3D 		null null null 6.80e-26 pra:PALO_01875
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=243 to=323 evalue=1.5e-25 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: superfamily 		null null null 1.50e-25 pra:PALO_01875
(db=HMMPfam db_id=PF01000 from=54 to=149 evalue=1.2e-23 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 1.20e-23 pra:PALO_01875
(db=HMMPfam db_id=PF01193 from=23 to=219 evalue=3.7e-19 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 3.70e-19 pra:PALO_01875
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=1 to=311 evalue=34.281 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 3.43e+01 pra:PALO_01875
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		100.0 339.0 659 2.40e-186 U7MF81_9ACTN
DNA-directed RNA polymerase subunit alpha n=90 Tax=Propionibacterium RepID=RPOA_PROAC similarity UNIREF
DB: UNIREF90 		96.8 null 640 3.40e-181 pra:PALO_01875