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CARPRO_8_30 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh similarity KEGG
DB: KEGG
99.9 999.99 2549 0.0 pra:PALO_01600
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh rbh KEGG
DB: KEGG
99.9 999.99 2549 0.0 pra:PALO_01600
DNA-directed RNA polymerase subunit beta' n=73 Tax=Propionibacterium RepID=RPOC_PROAC (db=UNIREF evalue=0.0 bit_score=2547.0 identity=97.43 coverage=99.0726429675425) similarity UNIREF
DB: UNIREF
97.43 99.07 2547 0.0 pra:PALO_01600
coiled-coil (db=Coil db_id=coil from=167 to=195 evalue=NA) iprscan interpro
DB: Coil
null null null null pra:PALO_01600
seg (db=Seg db_id=seg from=761 to=773) iprscan interpro
DB: Seg
null null null null pra:PALO_01600
coiled-coil (db=Coil db_id=coil from=198 to=219 evalue=NA) iprscan interpro
DB: Coil
null null null null pra:PALO_01600
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=9 to=1249 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
null null null 0.0 pra:PALO_01600
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=1 to=1244 evalue=0.0) iprscan interpro
DB: superfamily
null null null 0.0 pra:PALO_01600
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=4 to=1262 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 pra:PALO_01600
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=4 to=1262 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 pra:PALO_01600
no description (db=HMMSmart db_id=SM00663 from=310 to=589 evalue=7.0e-174 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart
null null null 7.00e-174 pra:PALO_01600
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=3 to=420 evalue=1.3e-118) iprscan interpro
DB: Gene3D
null null null 1.30e-118 pra:PALO_01600
(db=HMMPfam db_id=PF04997 from=9 to=417 evalue=1.4e-91 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 1.40e-91 pra:PALO_01600
(db=HMMPfam db_id=PF04998 from=825 to=1202 evalue=3.5e-69 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 3.50e-69 pra:PALO_01600
(db=HMMPfam db_id=PF00623 from=419 to=560 evalue=4.7e-51 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 4.70e-51 pra:PALO_01600
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=421 to=563 evalue=1.0e-31) iprscan interpro
DB: Gene3D
null null null 1.00e-31 pra:PALO_01600
(db=HMMPfam db_id=PF04983 from=564 to=718 evalue=1.4e-17 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 1.40e-17 pra:PALO_01600
(db=HMMPfam db_id=PF05000 from=748 to=815 evalue=8.5e-13 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 8.50e-13 pra:PALO_01600
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=5 to=1257 evalue=9.99 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP
null null null 9.99e+00 pra:PALO_01600
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
99.8 999.99 2547 0.0 U7MFD4_9ACTN
DNA-directed RNA polymerase subunit beta' n=91 Tax=Propionibacterium RepID=RPOC_PROAC similarity UNIREF
DB: UNIREF90
97.4 null 2499 0.0 pra:PALO_01600