Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh | similarity |
KEGG
DB: KEGG |
99.9 | 999.99 | 2549 | 0.0 | pra:PALO_01600 |
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh | rbh |
KEGG
DB: KEGG |
99.9 | 999.99 | 2549 | 0.0 | pra:PALO_01600 |
DNA-directed RNA polymerase subunit beta' n=73 Tax=Propionibacterium RepID=RPOC_PROAC (db=UNIREF evalue=0.0 bit_score=2547.0 identity=97.43 coverage=99.0726429675425) | similarity |
UNIREF
DB: UNIREF |
97.43 | 99.07 | 2547 | 0.0 | pra:PALO_01600 |
coiled-coil (db=Coil db_id=coil from=167 to=195 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | pra:PALO_01600 |
seg (db=Seg db_id=seg from=761 to=773) | iprscan |
interpro
DB: Seg |
null | null | null | null | pra:PALO_01600 |
coiled-coil (db=Coil db_id=coil from=198 to=219 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | pra:PALO_01600 |
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=9 to=1249 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | pra:PALO_01600 |
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=1 to=1244 evalue=0.0) | iprscan |
interpro
DB: superfamily |
null | null | null | 0.0 | pra:PALO_01600 |
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=4 to=1262 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | pra:PALO_01600 |
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=4 to=1262 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | pra:PALO_01600 |
no description (db=HMMSmart db_id=SM00663 from=310 to=589 evalue=7.0e-174 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 7.00e-174 | pra:PALO_01600 |
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=3 to=420 evalue=1.3e-118) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.30e-118 | pra:PALO_01600 |
(db=HMMPfam db_id=PF04997 from=9 to=417 evalue=1.4e-91 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-91 | pra:PALO_01600 |
(db=HMMPfam db_id=PF04998 from=825 to=1202 evalue=3.5e-69 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.50e-69 | pra:PALO_01600 |
(db=HMMPfam db_id=PF00623 from=419 to=560 evalue=4.7e-51 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.70e-51 | pra:PALO_01600 |
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=421 to=563 evalue=1.0e-31) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.00e-31 | pra:PALO_01600 |
(db=HMMPfam db_id=PF04983 from=564 to=718 evalue=1.4e-17 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-17 | pra:PALO_01600 |
(db=HMMPfam db_id=PF05000 from=748 to=815 evalue=8.5e-13 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.50e-13 | pra:PALO_01600 |
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=5 to=1257 evalue=9.99 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 9.99e+00 | pra:PALO_01600 |
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase |
UNIPROT
DB: UniProtKB |
99.8 | 999.99 | 2547 | 0.0 | U7MFD4_9ACTN | |
DNA-directed RNA polymerase subunit beta' n=91 Tax=Propionibacterium RepID=RPOC_PROAC | similarity |
UNIREF
DB: UNIREF90 |
97.4 | null | 2499 | 0.0 | pra:PALO_01600 |