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CARPRO_9_17

Organism: Propionibacterium sp.

near complete RP 53 / 55 MC: 11 BSCG 50 / 51 ASCG 0 / 38
Location: comp(15425..15718)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 97.0
  • Bit_score: 197
  • Evalue 1.50e-48
GREAB_2 (db=PatternScan db_id=PS00830 from=57 to=73 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
(db=HMMPfam db_id=PF01272 from=14 to=93 evalue=8.9e-18 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.90e-18

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Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGCTGCGCAACGCTGAGGTGGGCGAAGCCCCGTCCACTCCGGACGAGGTCGTGCCCGGTTCCAAGGTGACCGTCTGCTACTTCGACGACAAGTCCGACACTGACACCTTCCTGCTGGGATCGCGGCAGGTGATGGGGCTCGACGATTCCGTCGACATCTCCGTCTACTCCCCGCAATCCCCCCTTGGTGGTGCCGTTCTGGGCCATTCCAAGGGAGAATCGACCGAGTACAAGGCTCCCAATGGCAAGACGATCAAGGTGACGATCCTTGACGTCGAGCCGTTCCAGGAGTGA
PROTEIN sequence
Length: 98
MLRNAEVGEAPSTPDEVVPGSKVTVCYFDDKSDTDTFLLGSRQVMGLDDSVDISVYSPQSPLGGAVLGHSKGESTEYKAPNGKTIKVTILDVEPFQE*