ggKbase home page

cn_combo_scaffold_3934_12

Organism: CN-SCN_Eukaryote_unknown

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(10852..12837)

Top 3 Functional Annotations

Value Algorithm Source
PE-PGRS family protein n=1 Tax=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) RepID=C1AHW5_MYCBT similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 999.99
  • Bit_score: 584
  • Evalue 4.10e-163
Type VI secretion protein {ECO:0000313|EMBL:AKE69548.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 661.0
  • Bit_score: 1273
  • Evalue 0.0
VirD2 components relaxase similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 661.0
  • Bit_score: 1273
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1986
ATGAGCGACCGCCGCGACGACGATTTCCGCGTGCGTCCCAGCGCCCCGAAGAATCGGGGCAAGGGCCAGGGGCAGAGCTTCGTTTCCAAGGTGCTCAAGCAGGCGGGCAAGGCCAGCAGCGGCAAGTCCACGGTGCGCCGTCCGGCATCGGCGCGAGGCACCGGCCAGCGCCCCGGCTCGCGCCTCGGGCGCGGCCACACGGCGGCGCGCTTCGCCGGGGCGAAGCTGACGCCCATGTCCCGGCGCGTGACCATCAAGACCTTGCTGGTCAATCACCAACGGGCCAGCCCGCAATCGCTCGCCAAGCACCTTCGCTATATAGAGCGCGACGGCGTGGGCCGTGACAGCGAGCCGGGCCAAGCCTACGGGCCGCAGACCGACGCCGCCGACCTCGACGCCTTCAAGGAACGCTGCGCCGACGACCGGCACCATTTCCGTTTCATCCTCGCCCCCGAGGACGGCGCGGAGCTGGAAGACCTGCGCACCTACACGCGGCACCTCATGGGCCGCATGGAGGCCGATCTTGGGACGGGCCTCGATTGGGTTGCCGTGAACCACTGGAACACCGACAACCCGCACACGCACATCGTCGTGCGCGGGCGCGACGACACCGGCAAAGACCTCATCATCGCGGGCGACTACATCGCCGATGGCTTCCGCCATCGCGCCGCCGAACTGGCGACCGAATGGCTGGGGCCGCGCACCGAGTTGGAGATCCAGCAGACCTTGGGGCGCGAGGTGGAGCAAGAGCGGTGGACGAGCCTGGATCGCAGCTTGAAGCGCGAGGCCGGCGACGATGGCCTGGTGCATGTCGAACGGTTCAACGAACCGCGCTTGCAGCGCCAACGCCTGCTGCTGATCGGCCGCCTGCAACGCTTGCAGCGCCTGGGCCTGGCCGATGAGACGCAGCCCGGCACCTGGGCCGTCCATGCCGATGCGGAAAAGACCCTGCGCGCCCTGGGCGAGCGTGGCGACATCATCCGCACCATGCAGCGGGCCATGCGCGGCGAGCCGCGCGAGCTGGCGGTGTTCGAGCCGGGGGACGACGGCCGAACCATCCTCGGGCGCGTGGCCGCGAAAGGACTGGCCGACGAGCTGCGCGACCGAGGCTATCTGGTCATCGACGGCGTGGACGGCAAGGCCCATTACGTCGCGCTCAACGCCCGCGCCGAGCTGGCGAACTATCCGACCGGGGCCGTGGTGGAGGTGAAGGGATCGGCCGACGTGCGCGCGGCCGACAGGAACATCGCCGCGCTGGCGAGCGATGGCCTGTACCGCACCGATCATCACTTGGCCGTGGCGCAGGGCCAGGCCGTACCGGGCCGCGACCCGCAGGAGGTCGTGGCGGCCCACGTCCGCCGCCTGGAAGCCCTGCGCCGGGCCGGCATCGTGGAGCGCGTGGCCGAGGGGCTATGGAAGGTGCCGGGCGACCTGCCCGAGCAGGGCCGCCGCTACGACGCGCAGCGCCTGGGCGGCGTGGCCGTGGAGCTGAAATCGCACCTGCCCATCGAGCGGCAGGCCCGCGTGATCGGGGCCACCTGGCTCGACCAGCAGTTGATTGGCGGCGGCTCGGGCCTGGGCGACCTGGGCTTCGGTGGCGAGGCCAAGCAGGCGATGCAGCAGCGCGCCGACTTCCTGGCCGAACAGGGACTGGCCGAGCGGCGTGGACAGCGCGTGATCCTGGCGCGCAACCTGCTGGGCACGCTGCGCAACCGGGAACTGGCACAGGCCGCGAAGGACATTGCCGCAGAAACCGGCTTGGAGCATCGGCCCGTGGCCGACGGTCAGCGTGTGGCAGGCATCTACCGGCGCTCCGTCATGCTCGCCAGCGGGCGCTACGCGATGCTCGATGACGGCATGGGGTTCTCGCTGGTGCCGTGGAAGCCAGTGATCGAACAACGGCTGGGGCAGCAGCTTTCCGCGACGGTGCGCGGTGGCGGGGTGTCCTGGGAGATTGGGCGGCAACGCGGGCCTACTGTCGCTTGA
PROTEIN sequence
Length: 662
MSDRRDDDFRVRPSAPKNRGKGQGQSFVSKVLKQAGKASSGKSTVRRPASARGTGQRPGSRLGRGHTAARFAGAKLTPMSRRVTIKTLLVNHQRASPQSLAKHLRYIERDGVGRDSEPGQAYGPQTDAADLDAFKERCADDRHHFRFILAPEDGAELEDLRTYTRHLMGRMEADLGTGLDWVAVNHWNTDNPHTHIVVRGRDDTGKDLIIAGDYIADGFRHRAAELATEWLGPRTELEIQQTLGREVEQERWTSLDRSLKREAGDDGLVHVERFNEPRLQRQRLLLIGRLQRLQRLGLADETQPGTWAVHADAEKTLRALGERGDIIRTMQRAMRGEPRELAVFEPGDDGRTILGRVAAKGLADELRDRGYLVIDGVDGKAHYVALNARAELANYPTGAVVEVKGSADVRAADRNIAALASDGLYRTDHHLAVAQGQAVPGRDPQEVVAAHVRRLEALRRAGIVERVAEGLWKVPGDLPEQGRRYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGSGLGDLGFGGEAKQAMQQRADFLAEQGLAERRGQRVILARNLLGTLRNRELAQAAKDIAAETGLEHRPVADGQRVAGIYRRSVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQLSATVRGGGVSWEIGRQRGPTVA*