ggKbase home page

13_1_40cm_3_scaffold_1442_14

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(8798..9340)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 175.0
  • Bit_score: 145
  • Evalue 4.40e-32
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 178.0
  • Bit_score: 147
  • Evalue 3.30e-33
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89917.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 178.0
  • Bit_score: 147
  • Evalue 1.60e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 543
GTGAGGGGGGACCCCTCCGACACGGAGGTGGTGGCCCGCGTGCTTGGCGGCGATCGCGAGGCGTTCGGTCTCGTGATCCACCGCTACGAGACCGGCCTGCTGCGGTTCGCGACGCGCATGCTGGGGAGCCGCGACGTCGCGGCGGACGCCGTGGCCGAGGGCTTGGTCCGGGCGTACCGCCACCTCGCGAGCTGTCGGGATCCGTCGCGGCTGCGCACGTGGCTGTATCGCATCGTGGCGAACCGGTGCAAGAGCTACCTGTCGCGGCGGGCCGTCGGTGACGTTCCGCTGGAGGAGGCACCGCCCGTGGCCGACTCGACGGACAACGAGGCATCCCTCGAGCGCGCGGAGCAGTTGGCGCTCGTGGCGCAGGCCCTCGCCCGGCTGTCGCCGGACAAGCGCGAGGCGTTCGTGCTGAAGCATGTGGAGGGGCTGAGTTATCAGGAGATGGCCGCCGTGACCGGCGAGCGCATCCCGACGTTGAAGATGCGCGTGCATCGCGCGCGCGAAGCGCTGTTGCAGGTACTGGAGGACCACGCATGA
PROTEIN sequence
Length: 181
VRGDPSDTEVVARVLGGDREAFGLVIHRYETGLLRFATRMLGSRDVAADAVAEGLVRAYRHLASCRDPSRLRTWLYRIVANRCKSYLSRRAVGDVPLEEAPPVADSTDNEASLERAEQLALVAQALARLSPDKREAFVLKHVEGLSYQEMAAVTGERIPTLKMRVHRAREALLQVLEDHA*