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13_1_40cm_3_scaffold_317346_2

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(386..1006)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HLY4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 181.0
  • Bit_score: 201
  • Evalue 5.90e-49
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EDY53839.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces svice similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 181.0
  • Bit_score: 201
  • Evalue 8.30e-49
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 180.0
  • Bit_score: 199
  • Evalue 8.30e-49

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Taxonomy

Streptomyces sviceus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
GAACCGTTCGAGGCCCCCATGACGACAGATGGAGATGTGGGGCAGCAACCCGCCGAGGGCAGGAGCGCCGGTATCCCCGACGGGGCCCTCCTGGAGTCGATCGCCTCGGGGGACGCATCGGCGCTCCGCGCACTGTACCTGCGCCATGCGCCGTGGCTTCTCGCGAGGCTGTCACGCCGGTGCGCAGATCGAAGCGTCGTGGAGGAGGTCGTGCAGGACACGTTCGTGGCCGTGTGGCGAAGGCCCACCGCCTACCGGGGAGGCGGCGATGTGGCTGCGTGGATCTGGGGGATCGGGATCCGCCGCCTCATCGACCGGCTCCGGAGTTCGCGGAGACAATCTGCATGGGGCGCACTCCTGTCCTTTGGCCTCGAACACGAGGCCGAGCAGTCAGCGCCGGCCGGGCGGTCCGCCGAGGAGCAGGTCCTCCTGGGCATCGAATACGGCGACCTCGCCTCGGCCCTCAACCGATTGTCGCCCGAGCTGCGCGCCGTTCTCCAGGCCACCGCGCTCGACGGCCTCACCACCGTGGAAGCAGCTCGGCTGCTCGGCATCCCACCGGGAACCGTGAAGACGCGCCTGATGCGGGCTCGGGCACAGATACGAGAGGTCCTGGCATGA
PROTEIN sequence
Length: 207
EPFEAPMTTDGDVGQQPAEGRSAGIPDGALLESIASGDASALRALYLRHAPWLLARLSRRCADRSVVEEVVQDTFVAVWRRPTAYRGGGDVAAWIWGIGIRRLIDRLRSSRRQSAWGALLSFGLEHEAEQSAPAGRSAEEQVLLGIEYGDLASALNRLSPELRAVLQATALDGLTTVEAARLLGIPPGTVKTRLMRARAQIREVLA*