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13_1_40cm_3_scaffold_841_11

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(12370..13263)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 296.0
  • Bit_score: 466
  • Evalue 2.40e-128
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 297.0
  • Bit_score: 525
  • Evalue 3.60e-146
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 296.0
  • Bit_score: 466
  • Evalue 6.90e-129

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 894
ATGGCCCGATCGACGACAGGCAAGGCGAAAGCGTTTTTTCGCGCCAACCCGTCGGGTGCATTCGACCAATACCTCCAAGACATCCAGAAGCTGCCGTTGATCAAGGACCCCGCCGAGGAGCGCCGGCTGGCGCGGCGGGTGCAGCGCGGGGACGAGAAGGCCGCCGAGCGGCTCGTCACCGCCAACCTCCGATTCGTCATCTCTTACGTCAAGAAGTACCAGGGACACGGCCTCGATCTCTCCGAGCTGGTGGCCATCGGCAACGAGGGGCTGCTGAAAGCCGTGAAGAAGTTCGATCCCGATCAGGGCGTGAAGTTCATCTCGTACGCGGTGTGGTGGGTGCGCCAGGCGGTGCTGAAGGCGCTCGCCGAGCAGACCCGCAGCGTACGCATCCCGCTGAACCAGAACTCCCAGCTCATCCGGATGAGCCGGACCGAGACGTACCTCTCGCACGAGCTGGGCCGCGAGCCGACCGACGACGAGATCGCGCAAGCCCTCGAAGACACTGTCGAGAACGTCCGCACCGCCCGCCGCATGACGGCCGCCGAGCTGTCGCTCGACGCGCCGGTGGACCGCACTGACAAAGACGCGGCCACGCTTGGCGAGCGGTTCGCCGGCCAGGAGGGCGGCGAGATCGAGGACCGGACCGACGGTAAGCTGATGCGCGAGTTCATCGACCGCATCTTCCAGAAGTACCTCACCCCGCGCGAGCGCAAGATCCTCTACCTCTACTACGGCCTCGAGGAAGGCAGCGAGGCGATGACGCTGGAGAAGATCGGGGCGTTGATGGGCGTGACGCGGGAGCGAATCAGGCAGATCAGGGAGCGGGCGTTCGAGAAGCTCCGCGAGTCGCCTGATGGGAAGGCGCTGAAGGGATTCTGGAGAGCAGCGTAA
PROTEIN sequence
Length: 298
MARSTTGKAKAFFRANPSGAFDQYLQDIQKLPLIKDPAEERRLARRVQRGDEKAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDQGVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSQLIRMSRTETYLSHELGREPTDDEIAQALEDTVENVRTARRMTAAELSLDAPVDRTDKDAATLGERFAGQEGGEIEDRTDGKLMREFIDRIFQKYLTPRERKILYLYYGLEEGSEAMTLEKIGALMGVTRERIRQIRERAFEKLRESPDGKALKGFWRAA*