ggKbase home page

13_1_40cm_2_scaffold_15437_2

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(704..1711)

Top 3 Functional Annotations

Value Algorithm Source
membrane lipoprotein lipid attachment site; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 334.0
  • Bit_score: 527
  • Evalue 1.40e-146
Membrane lipoprotein lipid attachment site id=2817368 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 330.0
  • Bit_score: 516
  • Evalue 2.30e-143
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 324.0
  • Bit_score: 182
  • Evalue 1.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAGACACGTGACGCTCGCGATGCTCGCGACGTTCGCGGTCCTGGCGGCGGCCCTCGGCGCGCCCGGGGCGCAGTCGCCGCAGAAGGTCGTCTTCGCCCTGAACTGGTTCGCCGTGGGCGACCACGCGGCGTACTGGGTCGCCCTCGAGAAGGGCTACTACCGGGCGCGCGGCCTCGAGGTGGAGCTTCAAAACTCGAAAGGCTCCGGGGACTCCATCGCGAAAGTGGATACCGGCCGCGCCGACATCGGATTGGCCGACGCGGCGGTCGTCATTCCGAGGATCGCGCAGGGCGCTCGGGTGAAGATCGTGGGCGCCGTCTTCGACAACACCCCGCTCAACATGTGGATGTGGAAGTCGAGCGCCATCGCGACGCCGAAGGACCTCGAGGGCAAGACGCTTGCCGCGCCCCCCGGCGACGCCCAGCGCCAGCTCTTCCCGGCGTTCGCCAAGCTCCACGGCATCGACGCGTCCAAGGTCACGTGGGTGACCATCGAGCCCGCGGCCAAGTTCGTGACGCTCGCCGAGAAACGCGTCGACGTCGTCGCGGACTATCTCACCGGCCTGCCGTTCTACGAGAAGGCCCTCGGCCGTGAGAACGTCGCCAGCATGCCGTGGCACAAGCACGGCTTCGACACCTACTCGATGTCGGTGATCGCGAGCGAGAAAACGCTGAACGAGCGCCCGAGGGTCCTGCGCGACTTCGTCGCCGCCTCCTACACGGGCTGGCGGGACGTCATGGGCGACCCCAGAGCCGCGCTCGAGATCTTCAAGCGGCGCGTGCCCGAGATCGACCTCGCGCTGATCGAGCCGAACCTGAGGCTCGGGCTCGAGCTCATGAAGACCGACCGATATGCGAAGCACGGGATCGGCTGGATGGACCGCGCCAAGATGTGCGCGACGGTGGAGCTCATCAACACCTACATGCCCGACATGCCGCGCAGGGTCGGCTGCGACGAGGTCTTCACCAACGAGTTCCTGACGAGGATCGAGCCGCCCAGGCGTTGA
PROTEIN sequence
Length: 336
MRHVTLAMLATFAVLAAALGAPGAQSPQKVVFALNWFAVGDHAAYWVALEKGYYRARGLEVELQNSKGSGDSIAKVDTGRADIGLADAAVVIPRIAQGARVKIVGAVFDNTPLNMWMWKSSAIATPKDLEGKTLAAPPGDAQRQLFPAFAKLHGIDASKVTWVTIEPAAKFVTLAEKRVDVVADYLTGLPFYEKALGRENVASMPWHKHGFDTYSMSVIASEKTLNERPRVLRDFVAASYTGWRDVMGDPRAALEIFKRRVPEIDLALIEPNLRLGLELMKTDRYAKHGIGWMDRAKMCATVELINTYMPDMPRRVGCDEVFTNEFLTRIEPPRR*