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13_1_40cm_2_scaffold_3235_12

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(10242..11114)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD subunit; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 289.0
  • Bit_score: 442
  • Evalue 3.90e-121
Tyrosine recombinase XerC id=4819288 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 289.0
  • Bit_score: 346
  • Evalue 3.60e-92
recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 294.0
  • Bit_score: 275
  • Evalue 1.70e-71

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGCGACCCGCTGGCGGCGTACCTGAAATACCTGACGCTCGAGAGGGACGCGTCGCCTCACACGCTCCGGAGCTACCGGAGCGACCTTCGGGAGTTCCAAGTGTTCGTCGGGCGCGACAAGCCGCTCGGCGAGGTCGACGGGCGGACGGTGCGCGCATACCTGGCGCACCTGCACACCCGCGGCCTCGACGGGGCGTCCGTTGCCCGGAAGCTTGCCGCGCTGCGGAGCTGGTTCCGCTTCCTCGTCCGGCGGGGGAAGCTCGCCCGGAACGTGGCCCGTGACGTCCGCGGCCCACGTCTCGGACGGACGCTCGTGTCCTTCCTGCCGATCGACGAGGCGCAGGTGCTGGTCGACGGCAAGGCGGTCGGCGGCGCCGCGCGCGAGCGGGACGTGGCGATCCTGGAGCTCCTGTACGCGACGGGGCTACGCGTGTCCGAGCTGTCCAGCCTGGACATCGAGGATGTGGACCGGGCCGGAGCGACCGTGCGCGTGCTGGGCAAAGGACGGAAGGAGCGGATCGTCCCCTTCGGCCGCCGGGCCGCGCGCGCCCTCGACGCCTACCTCGGGCCGCGCGCGGAGCGGCGCGGGACGCTCTTCACCAACCACCGCGGCGGCCGCCTCTCCGTCCGCGCGATCCACGCGATCGTGCGGAAGAGCGCGGCCGCGTCGGGCATCGCGCGGCGGGTGAGCCCGCACACCCTCCGTCACACGTTCGCGACGCACCTGCTCGACGCGGGCGCCGACCTTCGGGTCATCCAGGAGCTCCTCGGCCATAGCCGACTCAGCACGACCCAGCGTTACACGCACGTCGGCGCCGACCGGCTCATGCGCGTCTACGACGCCGCGCACCCGCGGGCACGCGGCGCGTGA
PROTEIN sequence
Length: 291
MSDPLAAYLKYLTLERDASPHTLRSYRSDLREFQVFVGRDKPLGEVDGRTVRAYLAHLHTRGLDGASVARKLAALRSWFRFLVRRGKLARNVARDVRGPRLGRTLVSFLPIDEAQVLVDGKAVGGAARERDVAILELLYATGLRVSELSSLDIEDVDRAGATVRVLGKGRKERIVPFGRRAARALDAYLGPRAERRGTLFTNHRGGRLSVRAIHAIVRKSAAASGIARRVSPHTLRHTFATHLLDAGADLRVIQELLGHSRLSTTQRYTHVGADRLMRVYDAAHPRARGA*