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13_1_40cm_2_scaffold_38392_8

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 6381..7094

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_ similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 238.0
  • Bit_score: 399
  • Evalue 2.40e-108
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 238.0
  • Bit_score: 397
  • Evalue 8.50e-108
atoC; sigma-54-dependent transcriptional response regulator AtoC similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 235.0
  • Bit_score: 295
  • Evalue 1.70e-77

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGCCGGCGAGCACATCTTAATCGTCGACGACGAGCCCGGGATCCAGGCGACGCTGCGCGGCGTGTTGGAGGACGAGGGCTACCGCGTGACCGCCGTCGGCAGCGGCGCCGACGCGCTCCGGGTCGTCGCCGACGAGTCACCCGACCTCACCTTTCTCGACATCTGGATGGAGCGCATGGACGGCCTCGAGACGCTCGCCGAGATCAAGCGCACCCGTCCCGACGCGATCGTCGTGATGATCTCCGGGCACGGCACGATCGAGACCGCGGTGAAGGCCACCAAGCTCGGCGCGTACGACTTCATCGAGAAGCCGCTCTCCCTCGAGAAGACGCTGCTCATCGTCACCCGGGCGCTCGAGCACGCGCGGCTGGCCCGCGAGAACGCCGCGCTCCGCGAGAGCCTCGCCGGGCGCGCCGAGATCATCGGCGAGAGCGAGCCGGTCCGCCGGCTCCGCGAGCAGATCGTCACCGCCGCCCCGACGACCGGCCGCGTGCTGATCCGGGGCGAGAACGGCAGCGGCAAGGAGCTGGTGGCCCGCGCCGTCCACGCCCGGTCGGCGCGGCGCGAGCAGCCGTTCGTCGAGGTCAACTGCGCCGCGATCCCGGACGAGCTGATCGAGTCCGAGCTGTTCGGCCACGAGAAGGGCGCCTTCACGGGCGCGCTCGCGCGCCGCCGCGGGAAGTTCGAGCTCGCCGACGGCGGCACGCTCTTC
PROTEIN sequence
Length: 238
MAGEHILIVDDEPGIQATLRGVLEDEGYRVTAVGSGADALRVVADESPDLTFLDIWMERMDGLETLAEIKRTRPDAIVVMISGHGTIETAVKATKLGAYDFIEKPLSLEKTLLIVTRALEHARLARENAALRESLAGRAEIIGESEPVRRLREQIVTAAPTTGRVLIRGENGSGKELVARAVHARSARREQPFVEVNCAAIPDELIESELFGHEKGAFTGALARRRGKFELADGGTLF