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13_1_40cm_2_scaffold_461118_2

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(806..1348)

Top 3 Functional Annotations

Value Algorithm Source
TruB; H/ACA RNA-protein complex component Cbf5p; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Euryarchaeota_68_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 180.0
  • Bit_score: 277
  • Evalue 1.40e-71
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRUB_METKA similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 179.0
  • Bit_score: 205
  • Evalue 6.10e-50
TruB; H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 179.0
  • Bit_score: 205
  • Evalue 1.00e-50

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Taxonomy

RBG_16_Euryarchaeota_68_13_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 543
GTGTACGAGCTCGAACCGCTTGAGGTCGACGGTCGGAACGTCCTCTTCCGGGTGCGATGCGAATCGGGCACTTACATTCGCACGCTGTGCGCGGACATCGGCGACGCGCTCGGCGTCGGTGCAAACATGGTCGACCTACGCCGGACCCGGGCCGCGACGTTCGGCGAGGCGGACGCCCATCCCCTGAACGCATTCCGGGACGCCATCGCATATTGGAAGGAAGACGGCGACGACACACCGGTCCGCGCGATCCTTCGTCCCGTGGAGGATCTCCTCCGGCATTTGCCACGGATGATCATCAAGGACACCGCCGTGGATGCGCTCTGCCACGGAGCGAACCTCGCGGTCCCCGGCGTCGCGAAGCTGTCCGAGCACATTCGCGTCGGCGACCTCGTTGGCGTCTACACGGGGAAGGGCGAGGCCGTCGCAATTGCGAAGGCGCTCATGACGTCGGACCGGATCGTCATCGCGAAGTCCGGCGCCGCCGCCGACACGGACCGCGTGCTCATGGCTCCCGGGACCTACCCGCGACTCTGGAAGTGA
PROTEIN sequence
Length: 181
VYELEPLEVDGRNVLFRVRCESGTYIRTLCADIGDALGVGANMVDLRRTRAATFGEADAHPLNAFRDAIAYWKEDGDDTPVRAILRPVEDLLRHLPRMIIKDTAVDALCHGANLAVPGVAKLSEHIRVGDLVGVYTGKGEAVAIAKALMTSDRIVIAKSGAAADTDRVLMAPGTYPRLWK*