ggKbase home page

13_1_20cm_4_scaffold_39329_4

Organism: 13_1_20CM_4_Euryarchaeota_52_7

partial RP 20 / 55 MC: 13 BSCG 7 / 51 MC: 3 ASCG 21 / 38 MC: 16
Location: comp(1324..2136)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1E3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 247.0
  • Bit_score: 151
  • Evalue 9.20e-34
Transcription regulator-like protein {ECO:0000313|EMBL:ELZ28683.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometric UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 247.0
  • Bit_score: 152
  • Evalue 7.60e-34
Bacterio-opsin activator HTH domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 229.0
  • Bit_score: 149
  • Evalue 9.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halogeometricum pallidum → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 813
TTGTTCGAGCTCTTTCTACGAGTACAACACGACTGCCCACATAACGATCTAACCAGGAAGTTTCCAAACGCACGGATCTCAATGTGGTGCAACCACGCCGCGGACATTCTAGAGATCGAAGCCGACGGCTTCGCTACATTTGAAGGACTCCAGAAAGAGATGACCACTATCGCAAAGTCCGGGCGCGGCAAGATCATCTCGAAATCCTTCCATCAAGGCAAGTTCCAATTGATCGCCAAGACCTGCATGTGCGCAGGAAATGGAAAAGGGACCGACCCAATAATTGCAAGGCACAATTTCATGGAGGTCCCGCCGACTGTCTTGATGGGCGGCTGGGAACATTACCGACTGGTTGGATTCGACGATAGCGATGTCAAAGGTCTCCTTAGAGACTTGGACAAGATTGGGAAGATTGAGGTTCTTCACAAGAAGGAGATCGCCGAGGGAGTGACTGACGACGCCTTCCTCATGTCGTTGAGCAGTCTCTTCGGCCAATTAACTAGCAAACAGACCAAGGCCTTGTTGACGGCTGTTGAGGACGGCTACTTCGAGATACCCAAGAGAACTACTGCCGAGGATATTGCCAAGAGGAACGGCCAACCACGAAGCACCTTCGAAGAGCACATCAGGAAAGCCGAGAGTAAAATCATGTTCGCCATAGCGCCATACATGATGATGTACGCAAAAGTGCCCCGGTCACCTTTCAATACTCGAACCAGAGCAGCAGGGGCCAGCGTCGGTGCGAGAATGATGAGACAATTGACTGTCCAACTGGAAGCGGAGAATAGGTCGGATACCCGAGTGGCCAGTTAG
PROTEIN sequence
Length: 271
LFELFLRVQHDCPHNDLTRKFPNARISMWCNHAADILEIEADGFATFEGLQKEMTTIAKSGRGKIISKSFHQGKFQLIAKTCMCAGNGKGTDPIIARHNFMEVPPTVLMGGWEHYRLVGFDDSDVKGLLRDLDKIGKIEVLHKKEIAEGVTDDAFLMSLSSLFGQLTSKQTKALLTAVEDGYFEIPKRTTAEDIAKRNGQPRSTFEEHIRKAESKIMFAIAPYMMMYAKVPRSPFNTRTRAAGASVGARMMRQLTVQLEAENRSDTRVAS*