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13_1_20cm_4_scaffold_114903_2

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(1119..1529)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFC8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 136.0
  • Bit_score: 196
  • Evalue 2.20e-47
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV97338.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 136.0
  • Bit_score: 196
  • Evalue 3.00e-47
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 136.0
  • Bit_score: 196
  • Evalue 6.10e-48

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 411
TTTGTGAAAGTATTCCTCAACCTTCATCAATATAAATTTAAAGGAGAATTAGGAGGCTGGATCAGGAGAATTATGGTAACTACTGCTATTAATTATTTAAAGCGAAATGTTCGCTACCAGTCAGAACTTTTATTCCCGGATGACAATCTGCATGTGATCAGCAATGATCACCATCCTGAAGTGAAAATGGGTGCAAAAGAAATTGCAGATCTGATAAGACAATTGCCTCCGGGTTATCAGGCTATTTTCAACCTGTACGCTGTTGAAGGGTTTAGCCATGTGGAGATCGGAAAAATACTAGGTATACAGGAAAGCACTTCACGCTCACAATACGCAAGAGCAAGGGCTTTACTTATCCAATGGTTAGATCAAAAGACCAATGATGTTAAAAAAGCCAGTTATGCAAAATGA
PROTEIN sequence
Length: 137
FVKVFLNLHQYKFKGELGGWIRRIMVTTAINYLKRNVRYQSELLFPDDNLHVISNDHHPEVKMGAKEIADLIRQLPPGYQAIFNLYAVEGFSHVEIGKILGIQESTSRSQYARARALLIQWLDQKTNDVKKASYAK*