ggKbase home page

13_1_20cm_4_scaffold_142582_3

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: 862..1233

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=2 Tax=Rhodothermus marinus RepID=D0MHG6_RHOM4 id=5224686 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 124.0
  • Bit_score: 158
  • Evalue 4.50e-36
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RBG_16_RIF_WS3X_71_46_curated UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 123.0
  • Bit_score: 158
  • Evalue 6.30e-36
50S ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 112.0
  • Bit_score: 131
  • Evalue 1.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 372
ATGGGCCTGTTGGAAAAGGTCGAGAACACTCAGATCAAGACCGAGCGCCCGAACCTGCGCCCCGGCTTCACGGTCGAGGTGATGGTGCGCGTGATCGAGGGGGACAAGGAGCGCCAGCAGAAGTTCCGCGGCCTGGTCACCAACGTGCGCGGCGCCGGCATGCGCAAGACGTTCACCGTGCGCAAGATCTCGGAGGGCATCGGCGTCGAGCGCACGTTTCCGCTCCACTCGCCGGCGCTCGCCAGCATCACCGTGATCCCCTCGGAGCAGAAGAAGGTGCGTCGCGCGAAGCTCTTCTACCTGCGCAAGAAGAAGGGCAAGGCTGCCCGGCTGAAGGAACGCACGGGAGCCGGTACCAGCGCGACCGAGTGA
PROTEIN sequence
Length: 124
MGLLEKVENTQIKTERPNLRPGFTVEVMVRVIEGDKERQQKFRGLVTNVRGAGMRKTFTVRKISEGIGVERTFPLHSPALASITVIPSEQKKVRRAKLFYLRKKKGKAARLKERTGAGTSATE*