ggKbase home page

13_1_20cm_4_scaffold_20158_1

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: 181..3114

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A7C1B similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 999.99
  • Bit_score: 559
  • Evalue 6.90e-156
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93133.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 999.99
  • Bit_score: 670
  • Evalue 3.90e-189
TonB-dependent outer membrane protein, SusC/RagA similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 999.99
  • Bit_score: 649
  • Evalue 1.40e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2934
ATGAAACCGTGGAAACTGTTCTGGGTTCTGGCCCTGGCGGCGGCAGGTCCGCTGGAGGGGCAGGCCACCGGGCAAATCACCGGCATCGTCAAAAACAGCGACGGTCAGCCGACCGCGTCTGCCACCGTGATGGTGCGGGGGACGAAGCTCTCCACTGTGACCGGTACGGACGGCCGCTACACGCTGCCGGAGGTGCCACCCGGGTCGTACACGGTGGTCGCGGCGCTGATCGGCTACGGCTTCGCGACGGCGACGGCCAGTGTGGTCCCCGGTCAGGTGACCCAGCTGGACTTCGCGCTGGAAGCACGGGCGGTCCAGCTGGAGGGCGTCACGGTCGTCGGCTACGGCACGCAGGAGAAGCGCACCGTAACCGGTGCGGTGTCAACCATCACCGCTGACAAGCTGGTGGAGACACCGACGTTCAACGCGATCAAGGCGATGCAGAACCGGCTTGCGGGCGTGGACATCACGAACGCGGGCAACAAGCCCGGTGACCAGGCCAGCATCCGGATTCGCGGCGTGCGGTCCATTGGCGCGGGCAACGACCCGCTCATCGTGGTGGACGGCGTGCCGATCGCGGGCCGCCTCGACGACCTCGACCCGAATAACATCGTCTCCATCGACGTGCTGAAGGACGCGGCGTCGACCGCGATCTACGGCAGCCGCGGCGCCAACGGCGTCATCCTGGTGACGACCAAGGGGGCCGGCTTGGGCGGCGTGCAGACGGAGTTCCGGGTCGGCACGAGCTACGCCGGTCAAAGCGCGTACGGCCTCCCCACCCTGATGAACAACGACCAGTACCTGGCGATGCTGCAGGCCGCGGCCGCGTATGCGGGCAGCAGTACCGACCCGCAGACCCTGCTGTCGGAGCCCGGGAGGTATGCGGCCTACCAGGCCGGCCAGCACACCGACTGGCAGAAGCTGATCGCCCAGACGGGATACCTGAAGAACGCCCAGATCGGGATGAGTGGGATCTCCGGCAACACGCGATTCAACCTCTCCGGCAGCTACTTCGATCAGACCGGCACGGCGGTGGGCTTCGAGTTTAGCAAGGGCACAGGCGCGGCCTCGATCGATCACACGCAGGGCCGTCTGCGCCTGGGTGTGACCGGCAACTTCACACACTCCCTGCAGACCGTGAACGGCGGGGACGGCCTGTGGGGTGCCGCGCGCCAGCAGACCGGCTTCGGGTTACCGCGCGACGCATCCGGCGCGCTGATCACCAACCCTGACGGCGACCCGCTCGCCTACAACCCGCTCAAGCTGGTCCTGGGGAGGGTGAGCCAGAACCGGCGCGACCGCGTGTTCGCCTCGGCGTTCGCGCAGTTCGATCTGTTCCGCGGCGTCAACTTGCGCGTGAACTTCGGGCCAGACTACACCCAAGCCAGCACGGGCGACTTCACGGGCGCGGACGTCCAGTTCGGCGGCGCTTCGTTCCGCACCGCGTCCTTCAACCAGAACACCAACTTTCAGTACATCCTGGACAACATGCTGCAAGTCAGTCGCGACATCGGGACGTCACACCATGTCGATGCCACGCTGCTTTACGGGATCCAAAAGTCCCGCTTCACCTTCGGCAACGAGAGCGCGCAGCACATTCCCTACGACGAGGCGCTCTACTATGGAATCGGCCAGGGTGACAACTACCAGGCTTCCTCGGGCCTGAGCGAAACGGCGCTGCAGTCGTACATGGGGCGCGCCGTCTACACCTTCCGGGATAAGTACACCGTCATGGGTGCGGTCCGGCGTGATGGGTCTAGCGTGCTGGCCCCCGGCCACAAGTGGACGACCTTCCCGACCGTCGGCGTGGCCTGGCAGCTAGGCGACGAGCGCTTCATGCAACGCTTCGGCTGGCTGAGCAGCTTGAAGCTGCGTGGCAGCTACGGCAAGACCGGCAACGCGGCCATCAGCGCCTACCAGACCCAGGGCGCGCTCTCCAACGGGAAGATCAACTTCGGCTCAGTCACCGCTCCGGCCTACTATCCCAATCCGAACAATCCAGCCAACCCGGATCTGGGATGGGAGAAGACCGCCAAGACCGATGTGGCCGCCGATTTCGGCCTCTTCGGTAACCGCGTCACCGGCAGCCTCTCGTCCATCAACCTGGACAACCCGCAGGGGCTGCAATGGCGCTCCGAGGTGAGCTTCGCGCACAACAAGAACGAGATCACCGGACTCGCCTTCTACTCGGACACCACGCTCTGCCCGAGGGAGGCGCCCCGGTGCGACGCCAACAACGGCTGGTTCGTCGGTCAGCCCATCAACACCGGCGGCCAGACGGATCCGCTGAACTCGAACGGCGCCTTCACCGGCGATGCGCAGCGCCGTGTCTGGTACGACTACAAGCAGCTGGGTGTCTGGCAGCTGGGGGATTTGGCGCAAGCGGCGGCGTACGGCTCCAGGCCCGGCCAGATCCGCATCCAAGACACCAACGGCGACGGCATCATCAACGCCAAGGACAGGGTCCTGCAGGGCAACACCTACCCGAAGTGGACGGCCAACATCTACAATCGCTTCAAGTACCGGGGCGTCGACCTGTCGATCCTGGCCAACATCCGGTGGGGCTACACGATCTGGAACACCTACCTTCCCTCGCTCTTCGGCCGGTTCGGCCAGCTGGCGACGTCTTACTGGACGCCCACCAACCCGGACAACGTGAACCCGTCACCCAACCTGGGCGGGATCCCGCTCTCGTACGGCAACTCCCGCGGGTACATCGACGGGTCCCACTGGCGCATCCGCCAGGTGCAGCTCGGCTACACGCTTTCGCCGGAGATGGCTACCCGGGTGCGCGTGAAATCGCTGCGCATCTATGCCACCGCGAACGAGCCGTACGTGCACTACAAGTACAACTACTTCGACCCGGAGTCCGGCTACGCCGGCGGCTCGCCTGTGTACCGGAGCCTGTTGGTCGGCGCCGACGTGGTCTTCTAG
PROTEIN sequence
Length: 978
MKPWKLFWVLALAAAGPLEGQATGQITGIVKNSDGQPTASATVMVRGTKLSTVTGTDGRYTLPEVPPGSYTVVAALIGYGFATATASVVPGQVTQLDFALEARAVQLEGVTVVGYGTQEKRTVTGAVSTITADKLVETPTFNAIKAMQNRLAGVDITNAGNKPGDQASIRIRGVRSIGAGNDPLIVVDGVPIAGRLDDLDPNNIVSIDVLKDAASTAIYGSRGANGVILVTTKGAGLGGVQTEFRVGTSYAGQSAYGLPTLMNNDQYLAMLQAAAAYAGSSTDPQTLLSEPGRYAAYQAGQHTDWQKLIAQTGYLKNAQIGMSGISGNTRFNLSGSYFDQTGTAVGFEFSKGTGAASIDHTQGRLRLGVTGNFTHSLQTVNGGDGLWGAARQQTGFGLPRDASGALITNPDGDPLAYNPLKLVLGRVSQNRRDRVFASAFAQFDLFRGVNLRVNFGPDYTQASTGDFTGADVQFGGASFRTASFNQNTNFQYILDNMLQVSRDIGTSHHVDATLLYGIQKSRFTFGNESAQHIPYDEALYYGIGQGDNYQASSGLSETALQSYMGRAVYTFRDKYTVMGAVRRDGSSVLAPGHKWTTFPTVGVAWQLGDERFMQRFGWLSSLKLRGSYGKTGNAAISAYQTQGALSNGKINFGSVTAPAYYPNPNNPANPDLGWEKTAKTDVAADFGLFGNRVTGSLSSINLDNPQGLQWRSEVSFAHNKNEITGLAFYSDTTLCPREAPRCDANNGWFVGQPINTGGQTDPLNSNGAFTGDAQRRVWYDYKQLGVWQLGDLAQAAAYGSRPGQIRIQDTNGDGIINAKDRVLQGNTYPKWTANIYNRFKYRGVDLSILANIRWGYTIWNTYLPSLFGRFGQLATSYWTPTNPDNVNPSPNLGGIPLSYGNSRGYIDGSHWRIRQVQLGYTLSPEMATRVRVKSLRIYATANEPYVHYKYNYFDPESGYAGGSPVYRSLLVGADVVF*