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13_1_20cm_4_scaffold_27443_3

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(1571..2386)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YP93_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 271.0
  • Bit_score: 210
  • Evalue 1.70e-51
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB56655.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 271.0
  • Bit_score: 215
  • Evalue 1.20e-52
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 267.0
  • Bit_score: 199
  • Evalue 1.40e-48

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Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
GTGCAGGTGCGCCTCGGCGGGACGTTCTCGCTCAATCGTAACAAGGTGCTGGATCTGGGTGGCGACCAGGAGTTCTTTCTCCCCGGCGCAAACAGCTCACTCCCCAACATCCGCGACGGCGCGATCGTCCAGGTCGGCCAACCCCTCGGCAACTTCTATGGCTACGTGTTCGACGGGATCTTCCAGAGTCAGGCGGAGGTCACCGCGAGCAATCAGGGTGCTGCCCTGAAGGCTCAAGTGGGCGGCGAGAAGCTCAAGGACTTGAACGGCGATGGCAAGGTCGACCCCGACCACGATCGCACCACCCTCGGAAACGCCGTCCCCCGCTACCTGTTCGGCATCACCGGCGCTGTGACGCACAAAGGGCTCTCCCTGAGCTGGACCGTGCGAGGGGCGCTCGACTTCCAGATCGTAAACCTGAACCGCATGGGCATGGAGACGCCCGGCGGGTCGAGCAATATGCTCACCTCGGTCCTGAACTATTGGAGTCCGACGAATCCCACGAACTCGATGACCGGCATCGGCATCGCCCCGAGCTCCAGCATCATGACGTCGCGGTGGGTCGAGGACGGTTCGTTCATCCGGCTGCAAAACATCACGCTGCAGTGGGAGCTGCCGGCGCGGTGGACCGACCATTTCAGCGTGCAGCACCTGCGTTTCTACGTCAGCGCCCAGAACGTCCTCACCGCTACGCGCTACTCCTGGTACGACCCGGAAGTGAGCTCACGCGGCACCGGCGATCTGGATCTGGGTTGGGATGACTCGAGCTACCCGGGCGTGCGGACCGTCACCGTCGGCACGAACGTGACCTTCTAG
PROTEIN sequence
Length: 272
VQVRLGGTFSLNRNKVLDLGGDQEFFLPGANSSLPNIRDGAIVQVGQPLGNFYGYVFDGIFQSQAEVTASNQGAALKAQVGGEKLKDLNGDGKVDPDHDRTTLGNAVPRYLFGITGAVTHKGLSLSWTVRGALDFQIVNLNRMGMETPGGSSNMLTSVLNYWSPTNPTNSMTGIGIAPSSSIMTSRWVEDGSFIRLQNITLQWELPARWTDHFSVQHLRFYVSAQNVLTATRYSWYDPEVSSRGTGDLDLGWDDSSYPGVRTVTVGTNVTF*