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13_1_20cm_4_scaffold_4859_4

Organism: 13_1_20CM_4_Bacteriodetes_60_6

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1
Location: comp(5800..6261)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 152.0
  • Bit_score: 107
  • Evalue 1.50e-20
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG88339.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 152.0
  • Bit_score: 120
  • Evalue 2.40e-24
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 152.0
  • Bit_score: 120
  • Evalue 4.80e-25

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 462
ATGGCGTCGCGGATGCTGGGCTCCGCTGAGACAGCCGAAGAAGTCGTGCAGAGCGTGCTGCTCCGAATCTGGCGGCAGCGCGAGGAACTCGAGATCTCCGGAACGCTGGCGGGCTATCTGTACGCCGCGGTCCGCAACGGCGCGCTGATGCACCTGCGACGCGAACGCCTCGAGCGCCGCTGCCGGGAGCAGGCAGCCGCGGAGGGTGCCTCGCCGCTGATGGGAGAGCGGCCCCCGCAGCCAGACGAATGGACCCGGTCGGCTGAGCTCACCACCGCAATCCAGTACGCCATCCAGCAGCTCCCCCCTCGTTGTCAGGAGGCCTACCTCCTGCGCCGCGAGCAGGATCTCAGCTACGGGGAAATCGCACAGCTCATGGGCATCTCCCCCAAGACGGTGGAGGTCCAGATCGGTGCTGCAAACCGGGTTTTGCGCAAGCGCCTCGCGGTGTGGCTGGACTAA
PROTEIN sequence
Length: 154
MASRMLGSAETAEEVVQSVLLRIWRQREELEISGTLAGYLYAAVRNGALMHLRRERLERRCREQAAAEGASPLMGERPPQPDEWTRSAELTTAIQYAIQQLPPRCQEAYLLRREQDLSYGEIAQLMGISPKTVEVQIGAANRVLRKRLAVWLD*