ggKbase home page

13_1_20cm_4_scaffold_22530_4

Organism: 13_1_20CM_4_Cyanobacteria_61_6

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1
Location: comp(2487..3014)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Synechococcus sp. (strain WH8102) RepID=UPI00001B9F27 similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 112.0
  • Bit_score: 61
  • Evalue 1.40e-06
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU76227.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source UNIPROT
DB: UniProtKB
  • Identity: 29.7
  • Coverage: 138.0
  • Bit_score: 59
  • Evalue 5.70e-06
two-component response regulator or pseudogene similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 112.0
  • Bit_score: 61
  • Evalue 3.90e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGCTGTTAGTTCGGCGGGATTGGAGCGAGCTTCCGGGCGAGGACCTCACCACCTCGGCGCTGCCGGAGGTCTCGGGTTGGATTGCCATCTACGAGGAGATGGCATCTGTGTTGCGCTCCGTGATCGCTCGCGCCGAGGGCAGCCCGGATGCTGAGGAGCTCAGCCGCCACCTGGCCTGGATCGAGGGCCGCCTGGCGACGTGGCGGGACCGCCACGCCGAGCTGGCCGGCCTGGTCATCGATCGCAAGGACCACACTCTCACCTACGCGGGCAAGTCCCTCCGGTTGACCCGGCGAGAGGCCGACCTCCTGGACTTCCTGCTGCGCCACCCGCGCCATCCATTCACCAGCAAGCAGCTGGCGACGCTCGCCTGGCAGAATTCGCGGCTGTCGGAGGCCCAGGTCAGGACTTACATCATGAGATTGCGCAACCGGCTGCGCGAGGTGGGCCTGGGTGAGGTCATCACCGTGATTCGCAACCGCGGATACGGCATTGCGGCCACATTGGCGGTGGGTGCCGACCGATGA
PROTEIN sequence
Length: 176
MLLVRRDWSELPGEDLTTSALPEVSGWIAIYEEMASVLRSVIARAEGSPDAEELSRHLAWIEGRLATWRDRHAELAGLVIDRKDHTLTYAGKSLRLTRREADLLDFLLRHPRHPFTSKQLATLAWQNSRLSEAQVRTYIMRLRNRLREVGLGEVITVIRNRGYGIAATLAVGADR*