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13_1_20cm_4_scaffold_238424_1

Organism: 13_1_20CM_4_Cyanobacteria_61_6

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1
Location: comp(1..1080)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J640_NOSP7 similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 347.0
  • Bit_score: 525
  • Evalue 3.10e-146
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACC80740.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (str UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 347.0
  • Bit_score: 525
  • Evalue 4.40e-146
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 347.0
  • Bit_score: 525
  • Evalue 8.80e-147

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Taxonomy

Nostoc punctiforme → Nostoc → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
GACACCCGGCGTAGATTATCTCTCGTGGAGCAGGCCCTCGGTGCCAGCGCGGCAGTCGAAGCGGTCTATCGTAGCGACTGGGGCCGGATCATCGCCACGCTGATCCGGCTCGTCGGCGACTTCGACGTGGCCGAAGAGGCCGCCCAGGAAGCGTTCGCGACCGCCGTCGACCAGTGGCCGGTCTCCGGCGTCCCGGATCACCCGCGCGCCTGGATCATTCAGACCGCCCGACACAAGGCGATCGATCGCATCCGGCGTCGGGTGCGGTTCGGCGAGAAGCTCGATGCGTACGCCGCCGAGCTGCCCCCGGCCGTCGAGGAGCCGGAGTACGACCCTGACCAGATTCCCGACGACCGCCTGCGGTTGATCTTCACGTGCTGCCACCCATCGCTGTCGCTCGAGGCGCAAGTGGCGCTCACGCTCCGGACCCTGGGCGGCCTGGAGACGGACGAGATCGCGCGGGCGTTTCTCGTCCCCGTCGCCACGATGGCCCAGCGCCTCGTGCGCGCCAAGGGGAAGATCCGCGACGCCGGCATCCCGTATTCCGTACCGGACACGAAGGACATGCCCGGCCGGCTCGACGCCGTGCTGACCGTGATCTATCTGGTCTTCACCGAGGGCTACGCGGCCACGCGCGGCGATACGCTCGTGAGAACCGACTTCTGCGCCGAGGCGATTCGCCTCGCCCGCCTGGTGCGGACGTTGATGAGCCCGGAGCCGCCGTCCGAGGCGACAGCCCTGCTGGCCCTCATGCTGCTGCACGATTCGCGGCGCGAAGCCCGTCTGGACGACGCCGGCGACCTCGTCCTGCTCGAAGACCAGGACCGCGGCCGCTGGAACCACGCGCAGATCGACGAGGCGCTGCCACTCGTCGAGGAGGCGCTGCGCGGCGGCCCCGGCCCGTTCGCCCTGCAGGCCGCGATCGCGGCCCTGCATTGCCAGGCGGGGCGGGCCGAGGACACGGATTGGCCGCAGATCGTGAGCCTCTACGCGCTGCTCGAGCGCCTGCAGCCCTCGCCCGTCGTGTCGCTCAATCGCGCCGCCGCAGTGGCAATGGTGCAAGGCCCCCGTGCCGCGCTG
PROTEIN sequence
Length: 360
DTRRRLSLVEQALGASAAVEAVYRSDWGRIIATLIRLVGDFDVAEEAAQEAFATAVDQWPVSGVPDHPRAWIIQTARHKAIDRIRRRVRFGEKLDAYAAELPPAVEEPEYDPDQIPDDRLRLIFTCCHPSLSLEAQVALTLRTLGGLETDEIARAFLVPVATMAQRLVRAKGKIRDAGIPYSVPDTKDMPGRLDAVLTVIYLVFTEGYAATRGDTLVRTDFCAEAIRLARLVRTLMSPEPPSEATALLALMLLHDSRREARLDDAGDLVLLEDQDRGRWNHAQIDEALPLVEEALRGGPGPFALQAAIAALHCQAGRAEDTDWPQIVSLYALLERLQPSPVVSLNRAAAVAMVQGPRAAL