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13_1_20cm_4_scaffold_66763_1

Organism: 13_1_20CM_4_Cyanobacteria_61_6

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1
Location: comp(108..1964)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHS4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 604.0
  • Bit_score: 381
  • Evalue 1.60e-102
Sigma-54 interacting regulator {ECO:0000313|EMBL:CDM66572.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 612.0
  • Bit_score: 656
  • Evalue 2.80e-185
sigma-54 interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 604.0
  • Bit_score: 381
  • Evalue 4.60e-103

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
ATGGGATGCGGGACAGGCCTTACGCTCGCTCACGCCGCGCTGCTCCGGAAGGTGACGGATTTAGTCGAATACACAGTCGTTGACATGGCGATTACGAGTGAGACTCAGCGCGTCAGCGGTTTGCTTTCCATGGACCAGGGCGATGCGATGCTGGCCGCTCACCACTTCGGTCGGTGCGTCTCAATCTATGAAATACTCGGCGACCGCTACCGCAGCGCTTGTGCGTATTTCGACCTTGGCCGCGCTTATGCCGAGGCGCAACCTGAGCGCGCCGCTGAGCCACTATCGATGGCCGTGCAGATCTTCCGCCAGTTGGGTGCGCGAGCTGGCCTCACCCGGGCCGAGGACGCTCTCGCCGCGCTCGAGTCTCACGCGGGACAAAAGTTGTCGACCGATTTGCCGCTACGTTCGCACCGGTCCATCCTGAGAATGACGGAAGCTGTCACCTCGCGTGAACTGCTTCTGCGGGAATTCGCAGCTTTGATCCGCCATGAAACGATGGCCCACAAAGTATTGATTCTGGAGCCGGGAGATGAGTCGCGTCAGAGAGTTGTCACGACTTTCGGCTACGATGCATCGGAAGGCGAGCGACTAGCTGAGGTCTGGACCGGCGCAGGCGATGATGAAGCAAGAGAACTGTTCGCTGTCAGGGAAGACGCAGCTGTTATGCGCCTGCGTGTGGCCAATGCAACTCCTGCCGCCACCCTCTTCGTATCGCCGCGTGCATCGGTGGAATTTGCGGGCCGCGAAGAGATTGAGACGCTACTTCGCGTGGCCGAAATAGGACTTGACTTGTCCGCAGCCCGCGAGCGGTTGCGCGAGGGTGACGACGAGCAGTACCAGGCGCCACAAGTGAGCCCGAGCTTCATGCCCGGTTTTATTCATTCCAGTCCGGTCATGACTCGTCTCGTTGAGGAAATGCACAAGATTCGCTCTTCCGACGTGACTGTGCTGGTTACGGGCGAGTCCGGCACGGGCAAGGAGCTGGTGGCGCGCGCCATTCACATGCTCTCTTCGCGTCGTAAAAAAGTATTCGTACCCTTCAACTGCACGGCGGTACCCAGGGAGTTGTCGGAGGGCTACCTGTTCGGCTATCGCCGCGGCGCCTTTACCGGCGCGGTAGCAGATTCGCCCGGTGTAATCCGGACGGCCGCGGGCGGCACCCTCTTCATCGATGAGGTAGGCGACCTGCCGCTCGACGTGCAGCCAAAGCTTCTCAGATTCTTGCAAGAGGGCGAGATTCAGGCGCTCGGTGAACAGCGCCCACAGCAGGTCGACGTGCGCATCATCGCCGCCACCAACTGTGATCTGGAAGGCATGGTCAAACTGAAACAGTTCCGCGAAGACTTATACTACCGTTTGAATGTGATCCGTTTGGAAGTGCCTCCACTGCGGGAACGAAGGTCCGAGATTCCCGCAATCGTGAACCACTACGTGGACCATTACGCGGCCAAGTTTGGGAAGCGCGACATCGGTGTGACGTCACAGGCGGTAGACCTTCTAATGGTCCACGACTGGCCGGGTAACGTCAGGCAGTTGTGCAACGAGTTGCAGCGGGCGATCGCGCGTGCCTCAGACGGTACCGTCATCACCCCTGACCAGCTCTCGACGGAGGTTCGCCGCGTTCCCGCGCGTGGTGCGGCGCAGGAGTCGCTCGCGTCGTCTGACGCAATTGCGACCGACCGTGCCCCACACGCACTGCTTCCGAAGGCGGTGGAAAACCTGGAGCGTCGTATGATCGTGGAGGCACTTAGAAAACACGATGGCAACGTGTCTCGCGCTGCCCGCGAACTCGGCATTACTCGCCGAGGTTTGCAACTCAAGCTCGCCCGTTACGGAATAGCTGCCTCAGGTTAG
PROTEIN sequence
Length: 619
MGCGTGLTLAHAALLRKVTDLVEYTVVDMAITSETQRVSGLLSMDQGDAMLAAHHFGRCVSIYEILGDRYRSACAYFDLGRAYAEAQPERAAEPLSMAVQIFRQLGARAGLTRAEDALAALESHAGQKLSTDLPLRSHRSILRMTEAVTSRELLLREFAALIRHETMAHKVLILEPGDESRQRVVTTFGYDASEGERLAEVWTGAGDDEARELFAVREDAAVMRLRVANATPAATLFVSPRASVEFAGREEIETLLRVAEIGLDLSAARERLREGDDEQYQAPQVSPSFMPGFIHSSPVMTRLVEEMHKIRSSDVTVLVTGESGTGKELVARAIHMLSSRRKKVFVPFNCTAVPRELSEGYLFGYRRGAFTGAVADSPGVIRTAAGGTLFIDEVGDLPLDVQPKLLRFLQEGEIQALGEQRPQQVDVRIIAATNCDLEGMVKLKQFREDLYYRLNVIRLEVPPLRERRSEIPAIVNHYVDHYAAKFGKRDIGVTSQAVDLLMVHDWPGNVRQLCNELQRAIARASDGTVITPDQLSTEVRRVPARGAAQESLASSDAIATDRAPHALLPKAVENLERRMIVEALRKHDGNVSRAARELGITRRGLQLKLARYGIAASG*