ggKbase home page

13_1_40cm_2_scaffold_104322_2

Organism: 13_1_40CM_2_Ignavibacteria_61_4

partial RP 37 / 55 MC: 7 BSCG 33 / 51 MC: 4 ASCG 9 / 38 MC: 4
Location: comp(843..1865)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Acidobacteria_68_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 167.0
  • Bit_score: 190
  • Evalue 5.40e-45
RNA polymerase sigma factor id=4427992 bin=GWC2_Ignavibacteria_56_12 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 180.0
  • Bit_score: 178
  • Evalue 1.20e-41
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 179.0
  • Bit_score: 171
  • Evalue 4.00e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Acidobacteria_68_16_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
GTTGCTGATGTCGCCGTTTTCGTGCGCCAGCTATCGCGGCAGCTGAACCTCTTCGAGCATGCCGGACCGTTATTGGAGCGGCTGCGATCGGAAGAGCCATTCCCGAGCGGCGCCGCGATGCTTGCGCGGGCGCGCGAGATCCTGACGGCGCTCTCGGAAGCCGAGCAAATCGCCGTCATCAACGCGCATCCCCGCATCGGCGAGCGCCCGGACAAAGTGTCGGCTGCTTCCTTCAAAGAGCAGGGGTATCAGGACGACACGACACCGCCGGAAGTCTTCCTGCGGTTGGCGACGCTCAATGACGAGTACGAGGCGAAGTTCGGCTTTCGGTTCGTCGTCTTCGTGAATCGGCGCTCGAAAGAAGCGATCGTTCCCATTCTCGAGTCCCGACTGCGCGGCACGCGCGACGAGGAACGGCGGACCGCCCTGCGAGAGATCCTCGCGGTCGCCGAGGACCGGCAGTTGGCCTTCCAACGAGTCGATCTCGAGCGGCATCATAGCCCCGTGGCGGACGATCTTGTCGCCCGTGCGCAGGCTGGCGACCAGACGGCCTTCCGGGACCTCTACCGTCAGCACGCCGGCCGGGTGTATGCCCTGTGCCTGCGCCTTACCGGCGATGCTTATGCCGCCGAGGAGCGCACGCAGGACGTGTTCGTGCGTCTGTGGGACAAGCTGCGGTTGTTTCGCGGTGAAAGTGCGTTCAGCTCCTGGTTGCATCGTCTCGCCGTCAACGTGGTGATGAACGAGCATCGCACGACGGGGCGTCGCGAGCGGCGCGTGGCGACCACCGAGAACCCGGAAGCACTCGAACGGCACGTTGGACATTCCTCGGAAGGGCTGAGCATCGATCTCGAACGGGCAATTGCCGAGTTACCGGATGGAGCACGCGAGGTCTTTGTGTTGTATGACGTCGAGGGATACGGGCACGGCGAAATCGCTAGTCTCACCGGGATAGCCGAGGGCACGTCGAAGGCGCAGCTGTTTCGCGCTCGCAGGTTGTTACGGGAGAAGTTGGAACGATGA
PROTEIN sequence
Length: 341
VADVAVFVRQLSRQLNLFEHAGPLLERLRSEEPFPSGAAMLARAREILTALSEAEQIAVINAHPRIGERPDKVSAASFKEQGYQDDTTPPEVFLRLATLNDEYEAKFGFRFVVFVNRRSKEAIVPILESRLRGTRDEERRTALREILAVAEDRQLAFQRVDLERHHSPVADDLVARAQAGDQTAFRDLYRQHAGRVYALCLRLTGDAYAAEERTQDVFVRLWDKLRLFRGESAFSSWLHRLAVNVVMNEHRTTGRRERRVATTENPEALERHVGHSSEGLSIDLERAIAELPDGAREVFVLYDVEGYGHGEIASLTGIAEGTSKAQLFRARRLLREKLER*