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13_1_40cm_2_scaffold_59612_6

Organism: 13_1_40CM_2_Cyanobacteria_61_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1
Location: 3432..4052

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 195.0
  • Bit_score: 304
  • Evalue 1.20e-79
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 197.0
  • Bit_score: 275
  • Evalue 5.50e-71
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 195.0
  • Bit_score: 139
  • Evalue 1.00e-30

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 621
TTGTCTTCCAAGGTGGCGAAGGACATCAGCGCGCGGGTGGACGCCGACGCCGGACTGATGGAGGCGCTGCGCCGGGACGATCCCGCCGCCGCCGATCAGCTCGTCGAGCGCTACGGCGACCGGGTCTACCGGCTGGCCATGCGCATCACCGGCGTGAAGGAAGACGCCGAGGAAGCCGCCCAGGACGCGCTGTGGACGGCCGCCCGCAAGATCGACATGTTCAGGGGCGAGTCGGCGTTCGGCTCCTGGATCTACCGGATCACCGCCAACGCGGCGTACCAGAAGCTTCGGACGCGCCGGCGGACGGCCAACGAGGTCGCGCTGGACGACGTGCTGCCCTCGTTCGACAGCGACGGCCGGCACTTCGAGCCGATGGACGACTGGTCGAACCGGGTCGACGAGCAGGCCCTGCAGGGCGAGCTGCGCCAGGTCCTGACCGCCGCGATCGACGCGCTGCCGGTGGACTACCGGACCGCGCTGGCCCTGCACGACGTCGAGGGCGTGTCGAACCCCGACATCGCCGAGACGCTTGGCATCAGCCTGGCGGCGGTGAAGTCGCGCGTGCACCGCTCGCGGTTGTTCGTGCGCAAGCGCCTGTCCGAGTACCTCAAGTCTGCCTAG
PROTEIN sequence
Length: 207
LSSKVAKDISARVDADAGLMEALRRDDPAAADQLVERYGDRVYRLAMRITGVKEDAEEAAQDALWTAARKIDMFRGESAFGSWIYRITANAAYQKLRTRRRTANEVALDDVLPSFDSDGRHFEPMDDWSNRVDEQALQGELRQVLTAAIDALPVDYRTALALHDVEGVSNPDIAETLGISLAAVKSRVHRSRLFVRKRLSEYLKSA*