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ACD20_34

Alias: ACD20_1620.88547.14

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Displaying items 61-77 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_34_61

Not on your lists

comp(64757..65314)
DNA (558bp) protein (186aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=166)
coiled-coil (db=Coil db_id=coil from=126 to=147 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE04392.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_62

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65453..66658
DNA (1206bp) protein (402aa)
Gp97 n=1 Tax=Mycobacterium phage Myrna RepID=B5LJA1_9CAUD (db=UNIREF evalue=8.0e-20 bit_score=101.0 identity=34.57 coverage=54.228855721393)
seg (db=Seg db_id=seg from=300 to=314)
Gp97 {ECO:0000313|EMBL:EKE04393.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_63

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comp(67078..68070)
DNA (993bp) protein (331aa)
TIM-barrel protein, nifR3 family n=1 Tax=Thermincola sp. JR RepID=D5X9P3_9FIRM (db=UNIREF evalue=6.0e-74 bit_score=281.0 identity=44.38 coverage=95.4682779456193)
tRNA-dihydrouridine synthase
nifR3_yhdG: putative TIM-barrel protein, n (db=HMMTigr db_id=TIGR00737 from=12 to=328 evalue=3.1e-121 interpro_id=IPR004652 interpro_description=tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
tRNA-dihydrouridine synthase (db=HMMPIR db_id=PIRSF006621 from=6 to=329 evalue=1.0e-96 interpro_id=IPR001269 interpro_description=tRNA-dihydrouridine synthase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
ACD20_34_64

Not on your lists

comp(68099..70309)
DNA (2211bp) protein (737aa)
TPR repeat
TPR-like (db=superfamily db_id=SSF48452 from=165 to=505 evalue=5.4e-49)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=268 to=496 evalue=5.2e-43 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=507 to=720 evalue=1.7e-42 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
ACD20_34_65

Not on your lists

70754..72220
DNA (1467bp) protein (489aa)
seg (db=Seg db_id=seg from=103 to=182)
seg (db=Seg db_id=seg from=39 to=82)
coiled-coil (db=Coil db_id=coil from=298 to=319 evalue=NA)
coiled-coil (db=Coil db_id=coil from=185 to=244 evalue=NA)
ACD20_34_66

Not on your lists

comp(72286..75123)
DNA (2838bp) protein (946aa)
isoleucyl-tRNA synthetase
isoleucyl-tRNA synthetase
Isoleucyl-tRNA synthetase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSA5_9FIRM (db=UNIREF evalue=0.0 bit_score=1021.0 identity=51.75 coverage=97.2515856236787)
ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES (db=HMMPanther db_id=PTHR11946 from=13 to=884 evalue=0.0)
ACD20_34_67

Not on your lists

75362..77590
DNA (2229bp) protein (743aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Glycosyl hydrolase, family 57 n=2 Tax=Synechococcus RepID=Q2JMU9_SYNJB (db=UNIREF evalue=1.0e-145 bit_score=521.0 identity=36.88 coverage=98.7886944818304)
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=3 to=505 evalue=2.0e-89 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD20_34_68

Not on your lists

78015..80528
DNA (2514bp) protein (838aa)
ATPase
ATPase
Endopeptidase Clp ATP-binding chain n=1 Tax=Gloeobacter violaceus RepID=Q7NIW8_GLOVI (db=UNIREF evalue=0.0 bit_score=1126.0 identity=72.94 coverage=95.346062052506)
coiled-coil (db=Coil db_id=coil from=413 to=438 evalue=NA)
ACD20_34_69

Not on your lists

80560..80898
DNA (339bp) protein (113aa)
80560..80898 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04400.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_70

Not on your lists

80916..81830
DNA (915bp) protein (305aa)
seg (db=Seg db_id=seg from=226 to=240)
transmembrane_regions (db=TMHMM db_id=tmhmm from=257 to=274)
transmembrane_regions (db=TMHMM db_id=tmhmm from=225 to=247)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=187)
ACD20_34_71

Not on your lists

81947..83158
DNA (1212bp) protein (404aa)
Phosphopentomutase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF3_MAGSM (db=UNIREF evalue=3.0e-131 bit_score=471.0 identity=57.11 coverage=97.2772277227723)
phosphopentomutase (EC:5.4.2.7)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase (db=HMMPIR db_id=PIRSF001491 from=1 to=403 evalue=3.5e-186 interpro_id=IPR010045 interpro_description=Phosphopentomutase GO=Molecular Function: magnesium ion binding (GO:0000287), Cellular Component: cytoplasm (GO:0005737), Molecular Function: phosphopentomutase activity (GO:0008973), Biological Process: nucleotide metabolic process (GO:0009117), Biological Process: cellular metabolic compound salvage (GO:0043094))
ACD20_34_72

Not on your lists

83308..83484
DNA (177bp) protein (59aa)
seg (db=Seg db_id=seg from=26 to=49)
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=2 to=58 evalue=1.9e-06)
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=1 to=28 evalue=7.466 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain)
Uncharacterized protein {ECO:0000313|EMBL:EKE04403.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_73

Not on your lists

comp(83555..84235)
DNA (681bp) protein (227aa)
NUDIX family hydrolase
Nudix (db=superfamily db_id=SSF55811 from=11 to=152 evalue=4.8e-38 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=151 to=226 evalue=5.4e-22)
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=15 to=150 evalue=9.5e-15 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
plays an important role in the control of spontaneous mutagenesis [IPR] Jill Banfield (11/15/12)
ACD20_34_74

Not on your lists

comp(84564..85304)
DNA (741bp) protein (247aa)
biotin/lipoate A/B protein ligase
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=2 to=224 evalue=1.3e-42)
no description (db=Gene3D db_id=G3DSA:3.90.1550.10 from=4 to=223 evalue=9.9e-42)
LIPOATE-PROTEIN LIGASE (db=HMMPanther db_id=PTHR12561 from=4 to=185 evalue=2.2e-21)
lipoic acid breakdown Jill Banfield (11/15/12)
ACD20_34_75

Not on your lists

comp(85318..85608)
DNA (291bp) protein (97aa)
85318..85608 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04406.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_76

Not on your lists

85902..87098
DNA (1197bp) protein (399aa)
hypothetical protein
seg (db=Seg db_id=seg from=69 to=74)
seg (db=Seg db_id=seg from=11 to=26)
seg (db=Seg db_id=seg from=79 to=91)
ACD20_34_77

Not on your lists

87336..88067
DNA (732bp) protein (244aa)
seg (db=Seg db_id=seg from=100 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Pili subunits (db=superfamily db_id=SSF54523 from=13 to=70 evalue=2.2e-10)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=10 to=33 evalue=3.0e-05 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
Displaying items 61-77 of 77 in total

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