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ACD20_53

Alias: ACD20_6299.103852.14

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Displaying items 31-60 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_53_31

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30779..31852
DNA (1074bp) protein (358aa)
seg (db=Seg db_id=seg from=326 to=339)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
seg (db=Seg db_id=seg from=25 to=41)
POTRA_1 (db=HMMPfam db_id=PF08478 from=87 to=154 evalue=7.6e-09 interpro_id=IPR013685 interpro_description=Polypeptide-transport-associated, FtsQ-type)
ACD20_53_32

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comp(31954..32943)
DNA (990bp) protein (330aa)
peptidase M48 Ste24p
coiled-coil (db=Coil db_id=coil from=180 to=201 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Peptidase_M48 (db=HMMPfam db_id=PF01435 from=59 to=258 evalue=5.5e-10 interpro_id=IPR001915 interpro_description=Peptidase M48 GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508), Cellular Component: membrane (GO:0016020))
ACD20_53_33

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comp(32958..34430)
DNA (1473bp) protein (491aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Bacillus coagulans 36D1 RepID=C1PAZ4_BACCO (db=UNIREF evalue=8.0e-167 bit_score=590.0 identity=62.76 coverage=96.9450101832994)
seg (db=Seg db_id=seg from=156 to=163)
ACD20_53_34

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comp(34427..35548)
DNA (1122bp) protein (374aa)
hypothetical protein
seg (db=Seg db_id=seg from=111 to=125)
seg (db=Seg db_id=seg from=56 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=196 to=218)
ACD20_53_35

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35835..36017
DNA (183bp) protein (61aa)
IS116/IS110/IS902 family transposase
IS116/IS110/IS902 family transposase; K07486 transposase alias=ACD20_C00053G00035,ACD20_6299.103852.14G0035,ACD20_6299.103852.14_35 id=19188 tax=ACD20 species=Acaryochloris marina genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02664.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_53_36

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comp(36152..37171)
DNA (1020bp) protein (340aa)
nucleotide kinase-like protein
seg (db=Seg db_id=seg from=11 to=22)
seg (db=Seg db_id=seg from=26 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
ACD20_53_37

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comp(37155..37748)
DNA (594bp) protein (198aa)
seg (db=Seg db_id=seg from=157 to=164)
seg (db=Seg db_id=seg from=89 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
transmembrane_regions (db=TMHMM db_id=tmhmm from=112 to=134)
ACD20_53_38

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comp(37758..39806)
DNA (2049bp) protein (683aa)
TonB-dependent receptor
seg (db=Seg db_id=seg from=553 to=565)
seg (db=Seg db_id=seg from=227 to=238)
seg (db=Seg db_id=seg from=211 to=224)
ACD20_53_39

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comp(39803..40603)
DNA (801bp) protein (267aa)
xanthine dehydrogenase accessory protein XdhC
seg (db=Seg db_id=seg from=44 to=55)
xanthine_xdhC: xanthine dehydrogenase a (db=HMMTigr db_id=TIGR02964 from=19 to=248 evalue=2.6e-29 interpro_id=IPR014308 interpro_description=Xanthine dehydrogenase accessory protein XdhC)
XdhC_CoxI (db=HMMPfam db_id=PF02625 from=10 to=74 evalue=5.5e-16 interpro_id=IPR003777 interpro_description=XdhC- CoxI)
dehydrogenase below Jill Banfield (11/15/12)
ACD20_53_40

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comp(40654..41193)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVT0_9BACT (db=UNIREF evalue=1.0e-16 bit_score=89.0 identity=34.34 coverage=80.5555555555556)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=117)
ACD20_53_41

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comp(41186..43519)
DNA (2334bp) protein (778aa)
xdhB; putative xanthine dehydrogenase large subunit
xdhB; putative xanthine dehydrogenase large subunit
Xanthine dehydrogenase, C-terminal subunit n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJY2_BDEBA (db=UNIREF evalue=0.0 bit_score=731.0 identity=48.83 coverage=97.8149100257069)
seg (db=Seg db_id=seg from=240 to=247)
may only be in degradadation Jill Banfield (11/15/12)
ACD20_53_42

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comp(43507..44952)
DNA (1446bp) protein (482aa)
xdhA; putative xanthine dehydrogenase
xdhA; putative xanthine dehydrogenase
Xanthine dehydrogenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJY3_BDEBA (db=UNIREF evalue=4.0e-101 bit_score=372.0 identity=39.83 coverage=99.1701244813278)
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=42 to=50 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: electron carrier activity (GO:0009055))
ACD20_53_43

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45431..48112
DNA (2682bp) protein (894aa)
sensory transduction histidine kinase
Sensor protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VIH4_9CYAN (db=UNIREF evalue=2.0e-40 bit_score=172.0 identity=22.2 coverage=87.4720357941834)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
seg (db=Seg db_id=seg from=42 to=62)
ACD20_53_44

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48593..48862
DNA (270bp) protein (90aa)
48593..48862 + (rbs_motif=AGxAGG/AGGxGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_53_45
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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comp(49145..49918)
DNA (774bp) protein (258aa)
seg (db=Seg db_id=seg from=234 to=242)
seg (db=Seg db_id=seg from=245 to=257)
seg 234..242 Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
ACD20_53_46

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comp(50075..50890)
DNA (816bp) protein (272aa)
trehalose-phosphatase (EC:3.1.3.12)
Trehalose_PPase (db=HMMPfam db_id=PF02358 from=20 to=230 evalue=3.1e-34 interpro_id=IPR003337 interpro_description=Trehalose-phosphatase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: trehalose biosynthetic process (GO:0005992))
HAD-like (db=superfamily db_id=SSF56784 from=17 to=239 evalue=2.5e-30)
HAD-SF-IIB: HAD hydrolase, family IIB (db=HMMTigr db_id=TIGR01484 from=18 to=233 evalue=2.6e-23 interpro_id=IPR006379 interpro_description=HAD-superfamily hydrolase, subfamily IIB GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD20_53_47

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comp(50878..52239)
DNA (1362bp) protein (454aa)
Trehalose-6-phosphate synthase-phosphatase n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09CH7_STIAU (db=UNIREF evalue=1.0e-103 bit_score=380.0 identity=40.87 coverage=98.6784140969163)
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15 3.1.3.12)
Glyco_transf_20 (db=HMMPfam db_id=PF00982 from=2 to=451 evalue=1.8e-143 interpro_id=IPR001830 interpro_description=Glycosyl transferase, family 20 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: trehalose biosynthetic process (GO:0005992))
ACD20_53_48

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comp(52397..54280)
DNA (1884bp) protein (628aa)
TPR Domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q24CU7_TETTH (db=UNIREF evalue=4.0e-38 bit_score=163.0 identity=25.13 coverage=89.4904458598726)
peptidase S1 and S6 chymotrypsin/Hap
seg (db=Seg db_id=seg from=3 to=15)
seg (db=Seg db_id=seg from=107 to=121)
ACD20_53_49

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comp(54526..55326)
DNA (801bp) protein (267aa)
divalent heavy-metal cations transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=214 to=231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=263)
ACD20_53_50

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56214..57353
DNA (1140bp) protein (380aa)
mechanosensitive ion channel protein MscS
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
ACD20_53_51

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comp(57357..57935)
DNA (579bp) protein (193aa)
seg (db=Seg db_id=seg from=171 to=180)
Uncharacterized protein {ECO:0000313|EMBL:EKE02655.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_53_52

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comp(57950..61675)
DNA (3726bp) protein (1242aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
seg (db=Seg db_id=seg from=685 to=699)
PEP_ENZYMES_2 (db=PatternScan db_id=PS00742 from=812 to=830 evalue=0.0 interpro_id=IPR000121 interpro_description=PEP-utilising enzyme GO=Biological Process: phosphorylation (GO:0016310), Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
PYRUVATE, PHOSPHATE DIKINASE, CHLOROPLAST (db=HMMPanther db_id=PTHR22931:SF9 from=259 to=929 evalue=3.9e-235)
ACD20_53_53

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61918..62916
DNA (999bp) protein (333aa)
Reductase
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=28 to=327 evalue=1.2e-38)
no description (db=Gene3D db_id=G3DSA:3.50.50.60 from=28 to=324 evalue=4.8e-35)
Pyr_redox_2 (db=HMMPfam db_id=PF07992 from=34 to=299 evalue=6.3e-24 interpro_id=IPR013027 interpro_description=FAD-dependent pyridine nucleotide-disulphide oxidoreductase)
ACD20_53_54

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62927..63163
DNA (237bp) protein (79aa)
hypothetical protein
Glutathione S-transferase domain-containing protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDW9_ACIJO (db=UNIREF evalue=3.0e-12 bit_score=73.9 identity=48.72 coverage=96.2025316455696)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=77 evalue=2.0e-16 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
Glutaredoxin (db=HMMPfam db_id=PF00462 from=3 to=55 evalue=2.7e-08 interpro_id=IPR002109 interpro_description=Glutaredoxin GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
ACD20_53_55

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63318..64337
DNA (1020bp) protein (340aa)
type I glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
GAPDH-I: glyceraldehyde-3-phosphate dehydrog (db=HMMTigr db_id=TIGR01534 from=3 to=330 evalue=3.8e-170 interpro_id=IPR006424 interpro_description=Glyceraldehyde-3-phosphate dehydrogenase, type I GO=Biological Process: glucose metabolic process (GO:0006006), Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836 from=3 to=338 evalue=3.3e-169 interpro_id=IPR000173 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase subfamily GO=Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365), Biological Process: glucose metabolic process (GO:0006006), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
Glyceraldehyde-3-phosphate dehydrogenase (db=HMMPIR db_id=PIRSF000149 from=1 to=339 evalue=3.8e-156 interpro_id=IPR020831 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase family)
ACD20_53_56

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64858..66195
DNA (1338bp) protein (446aa)
TrkA-C domain-containing protein
seg (db=Seg db_id=seg from=249 to=260)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=230 to=362 evalue=1.2e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=226 to=366 evalue=1.3e-29 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACD20_53_57

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66304..67761
DNA (1458bp) protein (486aa)
Trk-type K+ transport system, membrane component
Trk-type K+ transport system, membrane component
K+ transporter TrkH n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WE9_METBU (db=UNIREF evalue=3.0e-95 bit_score=352.0 identity=45.8 coverage=96.2962962962963)
transmembrane_regions (db=TMHMM db_id=tmhmm from=421 to=443)
ACD20_53_58

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comp(67869..68777)
DNA (909bp) protein (303aa)
hypothetical protein
Fe-S oxidoreductase family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCD2_DESAH (db=UNIREF evalue=6.0e-64 bit_score=247.0 identity=44.41 coverage=96.6996699669967)
seg (db=Seg db_id=seg from=234 to=252)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=1 to=300 evalue=6.2e-34)
cytoplasmic psortb kelly wrighton (11/15/12)
ACD20_53_59

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comp(68794..69438)
DNA (645bp) protein (215aa)
haloacid dehalogenase superfamily enzyme, subfamily IA
Putative uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6S9_9SPHI (db=UNIREF evalue=4.0e-42 bit_score=174.0 identity=41.83 coverage=96.2790697674419)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=210 evalue=8.0e-44)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=4 to=210 evalue=5.8e-25)
ACD20_53_60

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comp(69440..69712)
DNA (273bp) protein (91aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE02627.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD20_C00053G00060,ACD20_6299.103852.14G0060,ACD20_6299.103852.14_60 id=19203 tax=ACD20 species=Methanobrevibacter smithii genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Displaying items 31-60 of 86 in total

View Taxonomy