Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
50S ribosomal protein L2 | rbh |
KEGG
DB: KEGG |
66.5 | 272.0 | 390 | 4.40e-106 | tjr:TherJR_0299 |
50S ribosomal protein L2 | similarity |
KEGG
DB: KEGG |
66.5 | 272.0 | 390 | 4.40e-106 | tjr:TherJR_0299 |
Ribosomal protein L2 n=1 Tax=Thermincola sp. JR RepID=D5XA86_9FIRM (db=UNIREF evalue=4.0e-106 bit_score=387.0 identity=66.54 coverage=98.9051094890511) | similarity |
UNIREF
DB: UNIREF |
66.54 | 98.91 | 387 | 4.00e-106 | tjr:TherJR_0299 |
RIBOSOMAL_L2 (db=PatternScan db_id=PS00467 from=218 to=229 evalue=0.0 interpro_id=IPR022671 interpro_description=Ribosomal protein L2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | tjr:TherJR_0299 |
rplB_bact: ribosomal protein L2 (db=HMMTigr db_id=TIGR01171 from=3 to=273 evalue=4.7e-184 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 4.70e-184 | tjr:TherJR_0299 |
Ribosomal protein, L2p/L2a/L8e/organellar L2 types (db=HMMPIR db_id=PIRSF002158 from=3 to=273 evalue=5.0e-127 interpro_id=IPR002171 interpro_description=Ribosomal protein L2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 5.00e-127 | tjr:TherJR_0299 |
RIBOSOMAL PROTEIN L2 (db=HMMPanther db_id=PTHR13691 from=93 to=273 evalue=4.4e-95 interpro_id=IPR002171 interpro_description=Ribosomal protein L2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.40e-95 | tjr:TherJR_0299 |
50S RIBOSOMAL PROTEIN L2 (db=HMMPanther db_id=PTHR13691:SF5 from=93 to=273 evalue=4.4e-95 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.40e-95 | tjr:TherJR_0299 |
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=127 to=268 evalue=5.4e-58 interpro_id=IPR008991 interpro_description=Translation protein SH3-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.40e-58 | tjr:TherJR_0299 |
Ribosomal_L2_C (db=HMMPfam db_id=PF03947 from=124 to=252 evalue=2.8e-53 interpro_id=IPR022669 interpro_description=Ribosomal protein L2, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.80e-53 | tjr:TherJR_0299 |
Ribosomal_L2 (db=HMMPfam db_id=PF00181 from=42 to=117 evalue=1.5e-33 interpro_id=IPR022666 interpro_description=Ribosomal Proteins L2, RNA binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.50e-33 | tjr:TherJR_0299 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=38 to=126 evalue=1.8e-30 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.80e-30 | tjr:TherJR_0299 |
no description (db=Gene3D db_id=G3DSA:2.30.30.30 from=118 to=197 evalue=4.3e-27 interpro_id=IPR014722 interpro_description=Translation protein SH3-like, subgroup) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.30e-27 | tjr:TherJR_0299 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=38 to=114 evalue=1.2e-25 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-25 | tjr:TherJR_0299 |
tjr:TherJR_0299 ribosomal protein L2; K02886 large subunit ribosomal protein L2 alias=ACD20_C00023G00014,ACD20_18280.45360.14G0014,ACD20_18280.45360.14_14 id=18374 tax=ACD20 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 557 | 3.00e-156 | tjr:TherJR_0299 |
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 273.0 | 557 | 1.00e-155 | K2E266_9BACT |